Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5461g00011 ATGCAAGCGATCATGCCACTAGTTTTGGCAAGCAGCACAACAGACAAACTAAAAATGTCATACGAATACGAGAATTATGACCCCTCCTTCCCCGACCAACCTGTGGTTGACTTATACCTTCCTGTTTGGGCAAGGTTACCAGCTTTCCACTCGAAACCAGCTTTCATTTGGGCTCAAGACTTTCACACCACCACTACCCTCACCTACCAACAACTCAACGACACTGTTCATCTCATCTCATCACAGCTGCAGGGTTCATTGCAAAGAGGAGACACTGTACTTCTTCTCTGCTCTCCAGGACTTGACCTAGTTGAGCTCATTTTCGGCTGCCAAAGAGCTGGTCTCTTGAGCGTACCTATAGTCCCTCCTCACCCTTCTTTCTCCAATCAAAACTACCACCACCTCGTAAGAGCCATTTCTCAGACCAAACCCAAAGCTGCCATAGCTCACTCTCACTACATTTCAAGCATTCGACGCTACCTCTCTTCTCCCCACAACAACACCAAGCTAGCTCACATGCTGCAAACCATCCACTGGATTTCCATTGACCATGTCAAACACGGCAAAGCCGTCGTTACTGTAAACAACCGTGATTCCCTAACATACAGTGGTTGTGCAGCAGATGAAGTTTATTTGGTTCAGTACACTTCTGGAGCCACTGGTGTCCCAAAACCCGTGCTTGTCACTGCTGGCTCAGCTGCTCACAACGTTAGAACTGCCAGAAAATCTTACGATCTTCATCCAAACAGCACCATCGTTTCGTGGCTGCCACAGTATCATGATTGTGGCCTCATGTTTCTGTTGCTGACCGTTGTCTCCGGTGCCACGTGTGTTCTCACGTCCCCAAACGCGTTCATCAAACGCCCCAGACTCTGGCTTGAACTCTTGTCCGAATTCAAGGCCACTTGCACTCCCGTTCCCTCGTTCACATTGCCACTAGTCATCAAGCGTGGAGGGATTAACCAAAGCGCTTTACCCATCAACCTGTCAACCTTGAAGAACCTTATAATCATCAATGAACCTATCTATAGAGACTCTGTGGAAGAATTCGTTCATACTTTTTCACCATTCGGGTTAAGCCCTTCTTCTATCTCTCCTTCCTACGGGTTAGCAGAGAACTGTACCTTTGTGTCCACTGCGTGGAGGAACTGCCACAGTGACAATATTGGTGCTTATGGTTCCAGCTTCCCAGATTTCCCAACTCACAACAAACTGTTACCGGTTGCAAGGCTCGGAAACATGGAGCAGGAAGACGTGGAGATTATGGTCGTAAACGAAGAAACCTTGGAGCCGAGTGAGGATGGAGTCGAAGGAGAAATTTGGGTTGCTTCACCAAGCAATGCTTCTGGGTACCTTGGCCACCCTAGCTTAACAAGAGAGGTGTTTCATGGAAGACTGAGAAACATGGTTAGTAAGTGCTTTCTTCGAACCGGGGACAAAGGCATCGTGAAAGGAGAAAAGAGATACCTCTTTGTTACTGGTCGCTGTCAAGATGTGATGGAACTCGAAAACGGTGAAAAGGTTCATCCACATTATATAGAGACTGCGGCGTATAATATTTGCTCCAAGTTACTCAGAGGAGGCTGCGTTGCAGCGTTTAAAGTTTCAGCAATGGTGGTGGTTGTGGCAGAGATGCAGAGGTTCGAAAAGGATGTGGATGTGGTTGTGTTGAAGTGGGTGTGTGAGAAAATTAAGGCAGGTGTCTGGAAGAAGGAGAAGGTAGAGATTGGATGGGTGGTTTTGGTTAAGAGTGAGTGTGTTCCCAAAACCACTTCTGGAAAATTGCAAAGAGGGAGGTGTAAGGAGAAGCTTCTCGCAGGGGAAATGGTGATTCTGATGGAAACACGGTTTGAAAAAGATGTTACTGGTTTTACGAGAGCACAGAACGTAAGAGAAGAAGCTTCGGAAGAGAAGGGTCAAGTGAACAGATCCCTTTCATGTATGGACACTCCTGCCTCTCTAATATCTCTTCTGATTGNGGTCGTAAACGAAGAAACCTTGGAGCCGAGTGAGGATGGCGTCGAAGGAGAAATTTGGGTTGCTTCACCAAGCAATGCTTCTGGGTACCTTGGCCACCCTAGCTTAACAAGAGAGGTGTTTCATGGAAGACTGAGAAACATGGTTAGTAAGTGCTTTCTTCGAACCGGGGACAAAGGCATCGTGAAAGGAGAAAAGAGATACCTCTTTGTTACTGGTCGCTGTCAAGATGTGATGGAACTCGAAAACGGTGAAAAGGTTCATCCACATTATATAGAGACTGCGGCGTATAATATTTGCTCCAAGTTACTCAGAGGAGGCTGCGTTGCAGCGTTTAAAGTTTCAGCAATGGTGGTGGTTGTGGCAGAGATGCAGAGGTTCGAAAAGGATGTGGATGTGGTTGTGTTGAAGTGGGTGTGTGAGAAAATTAAGGCAGGTGTCTGGAAGAAGGAGAAGGTAGAGATTGGATGGGTGGTTTTGGTTAAGAGTGAGTGTGTTCCCAAAACCACTTCTGGAAAATTGCAAAGAGGGAGGTGTAAGGAGAAGCTTCTCGCAGGGGAAATGGTGATTCTGATGGAAACACGGTTTGAAAAAGATGTTACTGGTTTTACGAGAGCACAGAACGTAAGAGAAGAAGCTTCGGAAGAGAAGGGTCAAGTGAACAGATCCCTTTCATGTATGGACACTCCTGCCTCTCTAATATCTCTTCTGTGA 2691 0.4671 MQAIMPLVLASSTTDKLKMSYEYENYDPSFPDQPVVDLYLPVWARLPAFHSKPAFIWAQDFHTTTTLTYQQLNDTVHLISSQLQGSLQRGDTVLLLCSPGLDLVELIFGCQRAGLLSVPIVPPHPSFSNQNYHHLVRAISQTKPKAAIAHSHYISSIRRYLSSPHNNTKLAHMLQTIHWISIDHVKHGKAVVTVNNRDSLTYSGCAADEVYLVQYTSGATGVPKPVLVTAGSAAHNVRTARKSYDLHPNSTIVSWLPQYHDCGLMFLLLTVVSGATCVLTSPNAFIKRPRLWLELLSEFKATCTPVPSFTLPLVIKRGGINQSALPINLSTLKNLIIINEPIYRDSVEEFVHTFSPFGLSPSSISPSYGLAENCTFVSTAWRNCHSDNIGAYGSSFPDFPTHNKLLPVARLGNMEQEDVEIMVVNEETLEPSEDGVEGEIWVASPSNASGYLGHPSLTREVFHGRLRNMVSKCFLRTGDKGIVKGEKRYLFVTGRCQDVMELENGEKVHPHYIETAAYNICSKLLRGGCVAAFKVSAMVVVVAEMQRFEKDVDVVVLKWVCEKIKAGVWKKEKVEIGWVVLVKSECVPKTTSGKLQRGRCKEKLLAGEMVILMETRFEKDVTGFTRAQNVREEASEEKGQVNRSLSCMDTPASLISLLIXVVNEETLEPSEDGVEGEIWVASPSNASGYLGHPSLTREVFHGRLRNMVSKCFLRTGDKGIVKGEKRYLFVTGRCQDVMELENGEKVHPHYIETAAYNICSKLLRGGCVAAFKVSAMVVVVAEMQRFEKDVDVVVLKWVCEKIKAGVWKKEKVEIGWVVLVKSECVPKTTSGKLQRGRCKEKLLAGEMVILMETRFEKDVTGFTRAQNVREEASEEKGQVNRSLSCMDTPASLISLL 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5461g00011 896 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 25 614 - -
Vium5461g00011 896 Pfam AMP-binding enzyme 49 502 IPR000873 -
Vium5461g00011 896 Pfam AMP-binding enzyme 659 740 IPR000873 -
Vium5461g00011 896 SUPERFAMILY Acetyl-CoA synthetase-like 658 844 - -
Vium5461g00011 896 CDD FAAL 48 606 IPR040097 GO:0008610
Vium5461g00011 896 SUPERFAMILY Acetyl-CoA synthetase-like 31 606 - -
Vium5461g00011 896 Gene3D - 614 734 IPR042099 -
Vium5461g00011 896 Gene3D - 27 496 IPR042099 -
Vium5461g00011 896 Gene3D - 502 613 IPR045851 -
Vium5461g00011 896 Gene3D - 740 856 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5461g00011 Vium-Chr5461 53365 56326 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5461g00011 208 604 Monolignol Biosynthesis Gene Families AT4G19010 25.845 1.18e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5461g00011 - - vum:124840869 1805.03