Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5451g00016 ATGTTACCAATATTCTTCAACAGTTGCAATGATCTAATTATCAAGTGGGAGGAGATGTCTTCAGACGGATCATGTGAAATAGATCTATGGCCTTTCCTTCAAAATTTAACCAGTGATATTATTGCTCGAGCTGCATTTGGAAGTAGTTATGAAGAAGGAAGAAGAATATTTGAACTTCTAAAAGAGCAAGCACAACTTGCAGCGCAAAGTATGATGAAAGATTACATCCCTGGATGGAGATTTATACCAACTGCTATGCATAGGAGGATGAAGGAAATTAACAGAGAAATAAAAGCTTCACTTAAAGATTTGATTAACAACAAAGAGAAAGCACTAGAGGTGGGTGAAACTACTGAGAATGACTTGTTATGTTTACTTTTGGAGTCAAATCACAAGGAAATTGAAGAACATGGAAACAGTAAGACTATTGGAATGAGTATTGAAGAGGTAATCGAGGAATGCAAGCTATTCTACTTTGCAGGGCAAGAAACCACTTCAACTTTACTTGTTTGGACCATGGTGATCTTAAGTATGCACCCTGATTGGCAAGCACGTGCAAGGGAGGAAGTTTTACAAGTATTTGGAAAACAAAAACCCGATTTTCTTGTGCTAAGTCACCTTAAGATTGTCACAATGATTTTGAATGAAGTTCTTAGGCTGTACTCACCAGTAATTGGCCTTAATAGAAATGTTGACGAAGACGTGAAACTTGGAAACCTATCATTACCTGCAGGAGTGCAAGTTTCCTTACCAACAATTATGGTTCACCATAATCCTGAACTTTGGGGTGATGATGCCGATAATTTCAATCCGGAAAGATTTTCTGAAGGAGTTCTAAAGGCCACTAATGGCAGAGTTTCATTTTTTCCATTTGGATGGGGTCCTAGAGTGTGCATTGGACAAAACTTTTCCATGTTGGAGGCAAAGATGGCTTTGTCAATGATTTTACAACATTTCACATTTGAACTTTCTCCAGCTTATGCTCATGCTCCTGTTTCAGTGCTTACTCTTCAACCCCGATATGGTGCTCATGTCATTTTACGTAAACTGCAAGTATAA 1059 0.3805 MLPIFFNSCNDLIIKWEEMSSDGSCEIDLWPFLQNLTSDIIARAAFGSSYEEGRRIFELLKEQAQLAAQSMMKDYIPGWRFIPTAMHRRMKEINREIKASLKDLINNKEKALEVGETTENDLLCLLLESNHKEIEEHGNSKTIGMSIEEVIEECKLFYFAGQETTSTLLVWTMVILSMHPDWQARAREEVLQVFGKQKPDFLVLSHLKIVTMILNEVLRLYSPVIGLNRNVDEDVKLGNLSLPAGVQVSLPTIMVHHNPELWGDDADNFNPERFSEGVLKATNGRVSFFPFGWGPRVCIGQNFSMLEAKMALSMILQHFTFELSPAYAHAPVSVLTLQPRYGAHVILRKLQV 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5451g00016 352 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 291 300 IPR017972 GO:0005506|GO:0016705
Vium5451g00016 352 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 342 - -
Vium5451g00016 352 PRINTS P450 superfamily signature 212 223 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00016 352 PRINTS P450 superfamily signature 160 177 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00016 352 PRINTS P450 superfamily signature 298 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00016 352 PRINTS P450 superfamily signature 289 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00016 352 Pfam Cytochrome P450 3 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00016 352 PRINTS E-class P450 group I signature 36 54 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00016 352 PRINTS E-class P450 group I signature 298 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00016 352 PRINTS E-class P450 group I signature 169 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00016 352 PRINTS E-class P450 group I signature 252 276 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00016 352 PRINTS E-class P450 group I signature 149 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00016 352 PRINTS E-class P450 group I signature 288 298 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00016 352 Coils Coil 94 114 - -
Vium5451g00016 352 Gene3D Cytochrome P450 1 351 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00016 352 SUPERFAMILY Cytochrome P450 1 348 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5451g00016 Vium-Chr5451 130103 132171 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5451g00016 1 350 Cytochrome P450 AT3G14610 58.640 4.16e-154 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5451g00016 - - gmx:100780780 603.208