Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5451g00015 ATGGAAGAATCATGGAGTACAAGTACAAGTGCATCTGCCTGCATAGTTCTCATAGTGCTTCTTACTCTAACATGCGCATGGAGGGTACTGAATTGGTTATGGCTAAGGCCAAAGAGACTAGAGAGACTCATGAGAGATCAAGGCCTTCAAGGAAACCCCTACAGGCTTTTCAATGGAGATTTGAAGCAGATGATGAAGATGCAAAAGGAAGTCACATCCAAAACCATGAAACTCTCTCATGATATAGCGCCACGTGTCTTTTCTTATCATCTGCAGAGTGTCATCAAACATGGGAAGAATCCTTTTATTTGGTTTGGACGAAAACCAAGGGTAATCATCACAGAGCCTGAGTTAATCAAAGATGTACTTAACAAGATCTATGCTTTTCCAAAGCCTGACACGAATCCGCTAGTCAAGTTAGTAGCTACTGGTCTTCTAAATTATGAGGGAGAAAAATGGCACAAGCACAGAAGAATAGTTAGTCCTGCATTCAATATGGAAAAGTTGAAGAATATGTTACCAATATTCTTCAACAGTTGCAATGATCTAATTATCAAGTGGGAGGAGATGTCTTCAGACGGATCATGTGAAATAGATCTATGGCCTTTCCTTCAAAATTTAACCAGTGATATTATTGCTCGAGCTGCATTTGGAAGTAGTTATGAAGAAGGAAGAAGAATATTTGAACTTCTAAAAGAGCAAGCACAACTTGCAGCGCAAAGTATGATGAAAGATTACATCCCTGGATGGAGGAGGATGAAGGAAATTAACAGAGAAATAAAAGCTTCACTTAAAGATTTGATTAACAACAAAGAGAAAGCACTAGAGGTGGGTGAAACTACTGAGAATGACTTGTTATGTTTACTTTTGGAGTCAAATCACAAGGAAATTGAAGAACATGGAAACAGTAAGACTATTGGAATGAGTATTGAAGAGGTAATCGAGGAATGCAAGCTATTCTACTTTGCAGGGCAAGAAACCACTTCAACTTTACTTGTTTGGACCATGGTGATCTTAAGTATGCACCCTGATTGGCAAGCACGTGCAAGGGAGGAAGTTTTACAAGTATTTGGAAAACAAAAACCCGATTTTCTTGTGCTAAGTCACCTTAAGATTGTCACAATGATTTTGAATGAAGTTCTTAGGCTGTACTCACCAGTAATTGGCCTTAATAGAAATGTTGACGAAGACGTGAAACTTGGAAACCTATCATTACCTGCAGGAGTGCAAGTTTCCTTACCAACAATTATGGTTCACCATAATCCTGAACTTTGGGGTGATGATGCCGATAATTTCAATCCGGAAAGATTTTCTGAAGGAGTTCTAAAGGCCACTGATGGCAGAGTTTCATTTTTTCCATTTGGATGGGGTCCTAGAGTGTGCATTGGACAAAACTTTTCCATGTTGGAGGCAAAGATGGCTTTGTCAATGATTTTACAACATTTCACATTTGAACTTTCTCCAGCTTATGCTCATGCTCCTGTTTCAGTGCTTACTCTTCAACCCCGATATGGTGCTCATGTCATTTTACGTAAACTGCAAGTATAA 1548 0.3908 MEESWSTSTSASACIVLIVLLTLTCAWRVLNWLWLRPKRLERLMRDQGLQGNPYRLFNGDLKQMMKMQKEVTSKTMKLSHDIAPRVFSYHLQSVIKHGKNPFIWFGRKPRVIITEPELIKDVLNKIYAFPKPDTNPLVKLVATGLLNYEGEKWHKHRRIVSPAFNMEKLKNMLPIFFNSCNDLIIKWEEMSSDGSCEIDLWPFLQNLTSDIIARAAFGSSYEEGRRIFELLKEQAQLAAQSMMKDYIPGWRRMKEINREIKASLKDLINNKEKALEVGETTENDLLCLLLESNHKEIEEHGNSKTIGMSIEEVIEECKLFYFAGQETTSTLLVWTMVILSMHPDWQARAREEVLQVFGKQKPDFLVLSHLKIVTMILNEVLRLYSPVIGLNRNVDEDVKLGNLSLPAGVQVSLPTIMVHHNPELWGDDADNFNPERFSEGVLKATDGRVSFFPFGWGPRVCIGQNFSMLEAKMALSMILQHFTFELSPAYAHAPVSVLTLQPRYGAHVILRKLQV 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5451g00015 515 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00015 515 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00015 515 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00015 515 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00015 515 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00015 515 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00015 515 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00015 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Vium5451g00015 515 FunFam Cytochrome P450 734A1 34 514 - -
Vium5451g00015 515 Gene3D Cytochrome P450 34 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00015 515 CDD CYP72 87 509 - -
Vium5451g00015 515 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00015 515 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00015 515 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00015 515 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00015 515 Coils Coil 257 277 - -
Vium5451g00015 515 SUPERFAMILY Cytochrome P450 84 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00015 515 PANTHER CYTOCHROME P450 FAMILY MEMBER 24 505 - -
Vium5451g00015 515 Pfam Cytochrome P450 96 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5451g00015 Vium-Chr5451 126484 129471 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5451g00015 11 513 Cytochrome P450 AT3G14690 53.606 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5451g00015 - - gmx:100780780 843.188