Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5451g00014 ATGGAAGAATCATGGAGTACAAGTACAAGTGCATCTGCCTGCATAGTTCTCATAGTGCTTCTTACTCTAACATGCGCATGGAGGGTACTGAATTGGTTATGGCTAAGGCCAAAGAGACTAGAGAGACTCATGAGAGATCAAGGCCTTCAAGGAAACCCCTACAGGCTTTTCAATGGAGATTTGAAGCAGATGATGAAGATGCAAAAGGAAGTCACATCCAAAACCATGAAACTCTCTCATGATATAGCGCCACGTGTCTTTTCTTATCATCTGCAGAGTGTCATCAAACATGGGAAGAATCCTTTTATTTGGTTTGGACGAAAACCAAGGGTAATCATCACAGAGCCTGAGTTAATCAAAGATGTACTTAACAAGATCTATGCTTTTCCAAAGCCTGACACGAATCCGCTAGTCAAGTTAGTAGCTACTGGTCTTCTAAATTATGAGGGAGAAAAATGGCACAAGCACAGAAGAATAGTTAGTCCTGCATTCAATATGGAAAAGTTGAAGAATATGTTACCAATATTCTTCAACAGTTGCAATGATCTAATTATCAAGTGGGAGGAGATGTCTTCAGACGGATCATGTGAAATAGATCTATGGCCTTTCCTTCAAAATTTAACCAGTGATATTATTGCTCGAGCTGCATTTGGAAGTAGTTATGAAGAAGGAAGAAGAATATTTGAACTTCTAAAAGAGCAAGCACAACTTGCAGCGCAAAGTATGATGAAAGATTACATCCCTGGATGGAGATTTATACCAACTGCTATGCATAGGAGGATGAAGGAAATTAACAGAGAAATAAAAGCTTCACTTAAAGATTTGATTAACAACAAAGAGAAAGCACTAGAGGTGGGTGAAACTACTGAGAATGACTTGTTATGTTTACTTTTGGAGTCAAATCACAAGGAAATTGAAGAACATGGAAACAGTAAGACTATTGGAATGAGTATTGAAGAGGTAATCGAGGAATGCAAGCTATTCTACTTTGCAGGGCAAGAAACCACTTCAACTTTACTTGTTTGGACCATGGTGATCTTAAGTATGCACCCTGATTGGCAAGCACGTGCAAGGGAGGAAGTTTTACAAGTATTTGGAAAACAAAAACCCGATTTTCTTGTGCTAAGTCACCTTAAGATTGTCACAATGATTTTGAATGAAGTTCTTAGGCTGTACTCACCAGTAATTGGCCTTAATAGAAATGTTGACGAAGACGTGAAACTTGGAAACCTATCATTACCTGCAGGAGTGCAAGTTTCCTTACCAACAATTATGGTTCACCATAATCCTGAACTTTGGGGTGATGATGCCGATAATTTCAATCCGGAAAGATTTTCTGAAGGAGTTCTAAAGGCCACTGATGGCAGAGTTTCATTTTTTCCATTTGGATGGGGTCCTAGAGTGTGCATTGGACAAAACTTTTCCATGTTGGAGGCAAAGATGGCTTTGTCAATGATTTTACAACATTTCACATTTGAACTTTCTCCAGCTTATGCTCATGCTCCTGTTTCAGTGCTTACTCTTCAACCCCGATATGGTGCTCATGTCATTTTACGTAAACTGCAAGTATAA 1572 0.3899 MEESWSTSTSASACIVLIVLLTLTCAWRVLNWLWLRPKRLERLMRDQGLQGNPYRLFNGDLKQMMKMQKEVTSKTMKLSHDIAPRVFSYHLQSVIKHGKNPFIWFGRKPRVIITEPELIKDVLNKIYAFPKPDTNPLVKLVATGLLNYEGEKWHKHRRIVSPAFNMEKLKNMLPIFFNSCNDLIIKWEEMSSDGSCEIDLWPFLQNLTSDIIARAAFGSSYEEGRRIFELLKEQAQLAAQSMMKDYIPGWRFIPTAMHRRMKEINREIKASLKDLINNKEKALEVGETTENDLLCLLLESNHKEIEEHGNSKTIGMSIEEVIEECKLFYFAGQETTSTLLVWTMVILSMHPDWQARAREEVLQVFGKQKPDFLVLSHLKIVTMILNEVLRLYSPVIGLNRNVDEDVKLGNLSLPAGVQVSLPTIMVHHNPELWGDDADNFNPERFSEGVLKATDGRVSFFPFGWGPRVCIGQNFSMLEAKMALSMILQHFTFELSPAYAHAPVSVLTLQPRYGAHVILRKLQV 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5451g00014 523 PANTHER CYTOCHROME P450 FAMILY MEMBER 24 513 - -
Vium5451g00014 523 FunFam Cytochrome P450 734A1 34 522 - -
Vium5451g00014 523 PRINTS E-class P450 group I signature 94 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00014 523 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00014 523 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00014 523 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00014 523 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00014 523 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00014 523 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00014 523 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00014 523 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00014 523 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00014 523 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00014 523 Coils Coil 265 285 - -
Vium5451g00014 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Vium5451g00014 523 SUPERFAMILY Cytochrome P450 84 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00014 523 CDD CYP72 87 517 - -
Vium5451g00014 523 Gene3D Cytochrome P450 34 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5451g00014 523 Pfam Cytochrome P450 96 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5451g00014 Vium-Chr5451 126484 129471 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5451g00014 28 521 Cytochrome P450 AT3G14640 56.627 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5451g00014 - - gmx:100780780 863.988