Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5419g00009 ATGGGGAAGTTGACTCTTCCGTTTGTTGGAATGATTATGGCGGAGTTTGCTCAAGTTGGTCTAATCATATTGAGCAAAAAAGCCATGGCACAAGGAATGACCAATTTCATCTTCATCTTCTATTCCAACACAATCGCTGCCCTCCTTCTTCTTCCCATTTCCTTACTTATACACAGATTTGAACGTCCTCCAATCACCTTTTCCATCCTTTGTGAATTCTTCCTGCTTGCACTGCTCGGTTATTTGGCGCAGGCTTTTGGGTATGCTGGGATTTACTACGGCTCAGCTACACTCAGCACATCCATTCTCAACCTCGTTCCTGGTTTTACTTTCGTACTTGCTGTTCTTTTTAGAATGGAACAATTAGATTGGAGAAAATTTAGCAGCCTAGCTAAGTCCTTGGGAACAATAGTTTCAATTGCTGGTGCTTTTATTGTGACTTTGTACAAGGGCCCTGCACTTTTGCTGGGAGTGTCATCGGCAGACTCATCTCCAAAGCGACTTTTATCGGTAGATTCTAATTGGATACTTGCAGGATTATTTCTCGCTGCTGATTGTGTAATGACTTCCGCATATATTATTTTACAGGCTTCTATTCTTAAAAAGTATCCAGCAGAGTTGATTGTTGTATTCTTTTATTGTTTCTTTGTGGCCATTCAATCTGCTGTGACTTGTTTAGTTGTGGAAAGAGACATCAATGCTTGGAGCTTGGAACCCAAGTTAAGGTTGCTTGCAGTATTATACTCGGGAGTCATGGGCTCTGCATTTCAAGTTGGTATTATTTCTTGGTGTTTGCACAAGACAGGACCAGTTTTTGTTTCCATGTTCAAGCCCTTAGGAATACTCATATCAGTGGTTTTAGGTGTTTTCTTCCTCGGAGACGCATTCTATCTTGGAAGTCTGGTTGGTGCTATTGTGATTGTTGTCGGGTTTTATTCTGTATTATGGGGGAAAGCCGAAGACATTAAAGATGGTGGAGTGAGAATGATACGTTACCAGAAAGTGGGAGATGAGCTCCTTTTGGAGGAAAACAGCCATGAGGACACACAAGGGCCTTAG 1059 0.4183 MGKLTLPFVGMIMAEFAQVGLIILSKKAMAQGMTNFIFIFYSNTIAALLLLPISLLIHRFERPPITFSILCEFFLLALLGYLAQAFGYAGIYYGSATLSTSILNLVPGFTFVLAVLFRMEQLDWRKFSSLAKSLGTIVSIAGAFIVTLYKGPALLLGVSSADSSPKRLLSVDSNWILAGLFLAADCVMTSAYIILQASILKKYPAELIVVFFYCFFVAIQSAVTCLVVERDINAWSLEPKLRLLAVLYSGVMGSAFQVGIISWCLHKTGPVFVSMFKPLGILISVVLGVFFLGDAFYLGSLVGAIVIVVGFYSVLWGKAEDIKDGGVRMIRYQKVGDELLLEENSHEDTQGP 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5419g00009 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 318 - -
Vium5419g00009 352 PANTHER WAT1-RELATED PROTEIN 7 322 IPR030184 GO:0016020|GO:0022857
Vium5419g00009 352 Pfam EamA-like transporter family 180 315 IPR000620 GO:0016020
Vium5419g00009 352 Pfam EamA-like transporter family 12 146 IPR000620 GO:0016020
Vium5419g00009 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5419g00009 Vium-Chr5419 82985 87059 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5419g00009 6 321 Nodulin-like Gene Family AT5G40230 44.720 1.22e-90 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5419g00009 - - vun:114164332 636.721