Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium540g00015 ATGAAACATTCTGTGATTTACCTTACTATGTGTCTTGCCTCTTCCATTATCATGGTGATGGCCACGGTACAAAGGGCAAGGTTCTTGTTGGGCACCAACGATTACTACGTTCGAGTGATCAACGGTTTCACTGACAATTCCTCTGTGCCGTTGGTGATTTGGTGTTCTTCCGAAGAGATGGATCTCGGAGGACGTGCCCTTCAGGAACACGATGATTTTAGCTGGGTGATGAGGCCAAATTTTTGGAGCAGCAATCGCATGAAGTGTACTATGAAATGGGACAGTACGAGGAAGAGTTTTGAGGCGTTTAAGGCTTCACGAGACACTGAACGATGTGGGATTCATAGGATGTGCTCCTGGATGGTCACTCAGGATGGCTTCTATTTCAGCAATGATGAGGTTAATTGGAGGAAGGACTTTTTGTGGTGA 429 0.4592 MKHSVIYLTMCLASSIIMVMATVQRARFLLGTNDYYVRVINGFTDNSSVPLVIWCSSEEMDLGGRALQEHDDFSWVMRPNFWSSNRMKCTMKWDSTRKSFEAFKASRDTERCGIHRMCSWMVTQDGFYFSNDEVNWRKDFLW 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium540g00015 142 PANTHER - 34 136 IPR010264 -
Vium540g00015 142 Pfam Plant self-incompatibility protein S1 37 142 IPR010264 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium540g00015 49 126 Carbohydrate Esterase AT3G16970 31.646 1.28e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium540g00015 - - gmx:100792052 278.1