Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5392g00001 ATGGATTATGAGTTACCTAAGATATTATCCTTTACCATGCCCTTTATTCTCTTCATGATTTTGGCACTCAAAATAGGGACCAGTCTCAAGAAAACTGGGTCATCTCAAAAAATACCACCAGGACCATGGAAGCTACCTGTCATAGGAAACATACACAATCTTCTTTCATCTGCACCACACAGAAAATTAAGAGACTTAGCCAAAATATATGGTCCTTTGATGCATCTCCAACTTGGGGAGGTCTTCACAATCATTGTTTCCTCACCAGAATATGCCAAGGAGATCATGAAAACCCATGATCTCATCTTTGCATCAAGGCCTACACTTCTAGCCTCTGATATATTGTCTTATGAATCCACAAATATAATTTTTGCACCCTATGGAAACTATTGGAGACAGCTTCGAAAAATCTGCACAGTGGAGCTTTTCACCCAAAAACGTGTCAGCTCATTCCAGCCAATAAGAGAAGAAGTACTGACCCATCTTGTCAAAATGATCGATTCACATAAAGGGTCTCCCTTGAACCTCACTGAAGCAGTGCTTTCATCTGTATATAACATCATGTCAAGAGCTGCGTTTGGCATGAAATGCAAAGACCAAGAGGAATTCATATCAGCGGTGAAAGAAGCTGTGGAAAGTGGATCGGGTTTTAACATAGGAGATCTGTTTCCTTCAGCTAAATGGCTTCAAATTATTACTGGTTTGAGGCCTAAGCTCGAGAGACTGCACGGACAAGTTGATAGGATATTAGGAGACATCATCAGTGAACACAAAGAGGCAAAGTCCAAAGGCAGAGGAGGCCAAGGTGAAGCAGAGGAAGATTTGATAGATGTTCTTCTAAAATTTCAGGATGGTAATGAAAGTAACAAGGATATTTCCTTAACTATTGACAATATCAAGGCTATAATCCTGGTGAGGATAATCTTCATCCCTTGA 936 0.4017 MDYELPKILSFTMPFILFMILALKIGTSLKKTGSSQKIPPGPWKLPVIGNIHNLLSSAPHRKLRDLAKIYGPLMHLQLGEVFTIIVSSPEYAKEIMKTHDLIFASRPTLLASDILSYESTNIIFAPYGNYWRQLRKICTVELFTQKRVSSFQPIREEVLTHLVKMIDSHKGSPLNLTEAVLSSVYNIMSRAAFGMKCKDQEEFISAVKEAVESGSGFNIGDLFPSAKWLQIITGLRPKLERLHGQVDRILGDIISEHKEAKSKGRGGQGEAEEDLIDVLLKFQDGNESNKDISLTIDNIKAIILVRIIFIP 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5392g00001 311 SUPERFAMILY Cytochrome P450 39 306 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5392g00001 311 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 15 304 - -
Vium5392g00001 311 Gene3D Cytochrome P450 29 308 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5392g00001 311 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5392g00001 311 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5392g00001 311 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5392g00001 311 Pfam Cytochrome P450 39 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5392g00001 Vium-Chr5392 4441 5384 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5392g00001 31 304 Cytochrome P450 AT5G24950 35.689 5.90e-54 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5392g00001 - - vum:124840650 613.609