Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5385g00005 ATGGCTGAATTTGGTGAGTATTTTGTGCTGCTTCTCTTGTGGCTATCCTCAATATTCTTGTTACATGTAATCCTCAAAAAGTTTCGTATGAGGCCACGCCGCCTACCACCAAGTCCTAGACGCCTCCCTGTATTAGGACACCTGCACCTCCTCACCAACCTCCCCCACCAAGCATTTCACACCATCTCATCACGCTATGGCCCTTTGGTCTACCTCTTGTTTGGTTCCAAACCTTGTGTTCTTGTTTCATCGCCTGAAATGGCAACTCAGTGCCTCAAAACCAACGAATCATGCTTCCTAAACCGACCCAAAAGAACAAATTTGGACTACATCACATACGGTTCTTCAGATTTTGTGCTGGCACCCTATGGACCTTATTGGAGGTTCATGAAAAGGGTTTGCATGACTGAACTCCTCGGAAGCCGCATGGTTCACCAGCACCTTCCCATTAGAGCTGAGGAGACAAGGCTGTTCTTGAACAGCATGATGCAAAAGGCTGGTTTGAGAGAGGAGGTGAACATAGGCAAGGAGCTAGCCATGCTCACAAATAACATAATCACAAGAATGGCTTTGAGAAGAAGGTGTTGTGATGTTGAAGGGGAAGGGCACCAGTTGATTGAGCTGGTGAAAGAGATGACCGAGCTTGGTGGGAAGTTCAACTTGGGAGACATGTTGTGGTTTGTTAGGAAGTTGGACTTGCAGGGGTTTGGTAAAAAGCTTGAGAGAGTTAGAAGTAGGTACGATGCCATAATGGAGAAGATCATAAAGGAACACGAAGATGCAAGAAGAAAGAAGAAGGAAAAAGGTGGTGATGGAGATGAAACGGTGAAGGATTTACTTGATATTCTGCTTGATATCTATGCTGATGAACATTCAGAGATTAGATTAACAAGAGAAAATATCAAGGCCTTCATAATGAATATGTTTGGTGCTGGAACCGAGACATCGGCCACTACAATAGAATGGGCTTTGGCTGAGCTAATCAACCATCCAGACATGATGGTAAAAGCAAGGGAAGAGATTGAATCAGTGGTTGGAAAGAACAGATTGGTGGAGGAATCAGATATTCCTAACCTTCCTTATGTTCAGTCCATAGTGAAGGAAACAATGAGGCTTCACCCCACAGGACCTTTGATAGCGAGGCAATCCACCGAAGATTGTAATGTTGAAGGGTATGAGATTCCAGCAAAAAGCACTGTGTTTGTGAATGTATGGGCCATTGGTAGAGATCCAAAGTACTGGGAAAAGCCAGTTGAGTTCAAGCCAGAGAGGTTCCTTGATGAAGAGGGAAAAAGCCCTTTGGATTTGAAGGGGCAGCATTTTGAACTTTTGTCATTTGGAGCTGGGAGAAGAAGCTGCCCTGGTGCTTCACTGGCTTTGCAGATCATTCCCACAACACTGGCTGGAATGATTCAGTGTTTTGAATGGAAGGTTGGTCAAGATGGTAAAGGAGTAGTTGACATGGAAGAGGGACCTGGAATGGCACTTCCTAGGGCACATCCCTTGCTATGTCTTCCAGTCGTTAGGTTTTGTCCTTTCGCTATAAGGGTATGTTAA 1557 0.4489 MAEFGEYFVLLLLWLSSIFLLHVILKKFRMRPRRLPPSPRRLPVLGHLHLLTNLPHQAFHTISSRYGPLVYLLFGSKPCVLVSSPEMATQCLKTNESCFLNRPKRTNLDYITYGSSDFVLAPYGPYWRFMKRVCMTELLGSRMVHQHLPIRAEETRLFLNSMMQKAGLREEVNIGKELAMLTNNIITRMALRRRCCDVEGEGHQLIELVKEMTELGGKFNLGDMLWFVRKLDLQGFGKKLERVRSRYDAIMEKIIKEHEDARRKKKEKGGDGDETVKDLLDILLDIYADEHSEIRLTRENIKAFIMNMFGAGTETSATTIEWALAELINHPDMMVKAREEIESVVGKNRLVEESDIPNLPYVQSIVKETMRLHPTGPLIARQSTEDCNVEGYEIPAKSTVFVNVWAIGRDPKYWEKPVEFKPERFLDEEGKSPLDLKGQHFELLSFGAGRRSCPGASLALQIIPTTLAGMIQCFEWKVGQDGKGVVDMEEGPGMALPRAHPLLCLPVVRFCPFAIRVC 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5385g00005 518 Pfam Cytochrome P450 36 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5385g00005 518 SUPERFAMILY Cytochrome P450 28 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5385g00005 518 FunFam Cytochrome P450 family protein 27 504 - -
Vium5385g00005 518 CDD CYP93 67 506 - -
Vium5385g00005 518 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5385g00005 518 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5385g00005 518 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5385g00005 518 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5385g00005 518 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5385g00005 518 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5385g00005 518 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5385g00005 518 Gene3D Cytochrome P450 25 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5385g00005 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Vium5385g00005 518 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 503 - -
Vium5385g00005 518 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5385g00005 518 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5385g00005 518 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5385g00005 518 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5385g00005 Vium-Chr5385 59852 61796 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5385g00005 1 509 Cytochrome P450 AT5G06900 51.663 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5385g00005 K24188 - gmx:100807524 856.284