Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5362g00002 ATGGAAGACCAAACCCAGAGAAAACCCAGAATCCTGTGCCTCCACGGATTCAGAACCAGTGGCGAAATCCTCAAGCAATTGGTCTTAAGATGGCCAGAACCTGTGATACAAAACTTGGACCTGGTGTTCCTCGATGGCCAGTTTCCCTCACAGGGAAGATCTGACGTTGAAGGCATTTTTGACCCTCCTTACTATGAATGGTTCCAAGCCAATGAGGACTTCTCTGAATATAGAAACTTCGAAGAGTGTTTAGCATACATAGAAGATTTCATGCTAAAAAATGGTCCTTTCGATGGTGTGTTGGGTTTCTCTCAGGGAGCAATTTTAGCAGCTGCATTGCCAGGAATGCAATCGCAGAATGAATACTTGACTTTTCGGGTGTAG 384 0.4479 MEDQTQRKPRILCLHGFRTSGEILKQLVLRWPEPVIQNLDLVFLDGQFPSQGRSDVEGIFDPPYYEWFQANEDFSEYRNFEECLAYIEDFMLKNGPFDGVLGFSQGAILAAALPGMQSQNEYLTFRV 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5362g00002 127 Pfam Serine hydrolase (FSH1) 7 120 IPR005645 -
Vium5362g00002 127 Gene3D alpha/beta hydrolase 4 127 IPR029058 -
Vium5362g00002 127 PANTHER OVARIAN CANCER GENE-2 PROTEIN-RELATED 2 124 - -
Vium5362g00002 127 SUPERFAMILY alpha/beta-Hydrolases 5 114 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5362g00002 Vium-Chr5362 37672 38807 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5362g00002 3 119 Sulfurtransferasese or Rhodanese AT1G09280 35.000 4.20e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5362g00002 - - vvo:131650459 222.246