Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5362g00001 ATGGAAGACCAAACCCAGAGAAAACCCAGAATCCTGTGCCTCCACGGATTCAGAACCAGTGGCGAAATCCTCAAGCAATTGGTCTTAAGATGGCCAGAACCTGTGATACAAAACTTGGACCTGGTGTTCCTCGATGGCCAGTTTCCCTCACAGGGAAGATCTGACGTTGAAGGCATTTTTGACCCTCCTTACTATGAATGGTTCCAAGCCAATGAGGACTTCTCTGAATATAGAAACTTCGAAGAGTGTTTAGCATACATAGAAGATTTCATGCTAAAAAATGGTCCTTTCGATGGTGTGTTGGGTTTCTCTCAGGGAGCAATTTTAGCAGCTGCATTGCCAGGAATGCAATCGCAGGGTGTAGCACTTGGGAAGGTAGAGAAGATCAAGTTTTTGATTGTGATATCTGGAGCCAAGTTTGGTGGAAACAAGTTTGGAATGCCTAAATTGGCTTCTAATGCATTTTCAAAACCAATTGATTGCTTATCTCTTCACTTCATTGGGGAGAAAGATTTCATGAAGGAAGAGAGCGTTGCTTTGCTGGAAGCATTCCAGAATCCTGTTGTGATTCATCACCCCAAAGGACATACAGTCCCCAAACTTGATGATAAAAGTCTTGAAATTATGGTTAATTTTACTGACAGGATTCAGAGGATGATTTAA 663 0.4223 MEDQTQRKPRILCLHGFRTSGEILKQLVLRWPEPVIQNLDLVFLDGQFPSQGRSDVEGIFDPPYYEWFQANEDFSEYRNFEECLAYIEDFMLKNGPFDGVLGFSQGAILAAALPGMQSQGVALGKVEKIKFLIVISGAKFGGNKFGMPKLASNAFSKPIDCLSLHFIGEKDFMKEESVALLEAFQNPVVIHHPKGHTVPKLDDKSLEIMVNFTDRIQRMI 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5362g00001 220 FunFam esterase AGAP003155 5 220 - -
Vium5362g00001 220 PANTHER OVARIAN CANCER GENE-2 PROTEIN-RELATED 2 219 - -
Vium5362g00001 220 SUPERFAMILY alpha/beta-Hydrolases 5 199 IPR029058 -
Vium5362g00001 220 Pfam Serine hydrolase (FSH1) 7 203 IPR005645 -
Vium5362g00001 220 Gene3D alpha/beta hydrolase 4 219 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5362g00001 Vium-Chr5362 36838 38807 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5362g00001 3 199 Sulfurtransferasese or Rhodanese AT1G09280 30.396 7.24e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5362g00001 - - gmx:100794918 394.43