Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium5337g00007 | ATGGACAATATCTTACCTATGTCAAGATATATGGATATTCCTATTCGACACTTGTACCAATGCAATACAAAGACAGAAAAAATGGCATTCTTTAGAACACTCCTATCAGTTGTTTTCCTCTCAACCTTTCTCCGATCAGCAGCATCAACAAACACCATCGATTCCCTCATACCCTACAAAAAGTTCATAAAAGATCAGTGCAATTCAACCACTAACGCAGCACTTTGCTACAACTCTCTCTCCCCGTACGCATCGAAGATCAAAAGAAACCGCCTAACGCTCACGAAACTCTCCATTCATGTGGCTCTAAAAGCAGCCAAGAGTGCCAATAGCACGTTGACGAGGTTGTCGAAGGTGAAGCTATCACATGGAGAAAGCTCCGTCATTGCCGACTGCAGAGAGACCATTGCGGACACGTTGGATCTGCTTCAGAAATCTACACAAGCGTTGGCACATTTGAACGGTGCCTCTACTGCTGATGAGAGGTTTCAATGGGACAGCATCAAGACCTGGCTCAGTGCTTCCATAACAGATGGATCTACTTGCATCGATGAGTTTGATGAAATAAAAGTGCGTTCTTCGCTGCGGAACATGATCAAAACCACCGTTTCTAACGTTTCTTCCTTGATTAGCATTGCTTTGGCACTCGTCAACAGGCTTTTCTAG | 666 | 0.4414 | MDNILPMSRYMDIPIRHLYQCNTKTEKMAFFRTLLSVVFLSTFLRSAASTNTIDSLIPYKKFIKDQCNSTTNAALCYNSLSPYASKIKRNRLTLTKLSIHVALKAAKSANSTLTRLSKVKLSHGESSVIADCRETIADTLDLLQKSTQALAHLNGASTADERFQWDSIKTWLSASITDGSTCIDEFDEIKVRSSLRNMIKTTVSNVSSLISIALALVNRLF | 221 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium5337g00007 | 221 | SMART | PMEI_2 | 58 | 216 | IPR006501 | GO:0004857 | |
Vium5337g00007 | 221 | NCBIfam | pectinesterase inhibitor domain | 35 | 220 | IPR006501 | GO:0004857 | |
Vium5337g00007 | 221 | Pfam | Plant invertase/pectin methylesterase inhibitor | 61 | 216 | IPR006501 | GO:0004857 | |
Vium5337g00007 | 221 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 36 | 216 | - | - | |
Vium5337g00007 | 221 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 60 | 220 | IPR035513 | - | |
Vium5337g00007 | 221 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 59 | 220 | IPR035513 | - | |
Vium5337g00007 | 221 | CDD | PMEI-like_3 | 67 | 220 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium5337g00007 | Vium-Chr5337 | 27691 | 28783 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium5337g00007 | 67 | 221 | Carbohydrate Esterase | AT1G53840 | 28.571 | 2.25e-09 | 55.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium5337g00007 | - | - | vum:124840556 | 428.713 |