Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5247g00009 ATGGAGATGTCATCACGAATGAATGAGGTGGAAGATGTTTCTCCTGCAGATGGCGTCCCTGAGCTGGCCAAAGAGTTGGAGCGTATGGTGGATAGATACAGCAGCGGGAGGAGCAATTTTGTTTGGGAGGATGAGGAGGCAGAAGACGAGGACATGTCCCTCTTGCAATTCCTAGACATGGTGGATCGCATCTCCGCTGCTTCGGCTTCCTTATCATCTTCTTCTTCTTCCTCCTCTTCTACTGTGATTGCCTTCCAGGAGGAGTTGGACCTGATCGCCTTCGTCCTAGAAAAAGCAATGTCCCTACTAGAGAAACATCTTTCTCATCTTCTACACGACGACCCCAAATCTAAACCACCCAACAAATCCTTCTCCTTTAATTCTCCCTCATACCTTTCTTCTGTTCCCGAGTCTCCCTCCCCTAGACCACCACAGCAGGATCACCACACCCAAGACCCCTTTGATTTCTCTCCGCAAAAGATTTCTACTTTGAACAAGATCGCCACTGCCATGATCTCAGCCGGCTACCACATCGAGTGCTACTTGGTTTTTGCTAGTTTCAGGCGAACTGCTTTCAGAACCACGCTCCATACATTTGGATTCGGGAACACCAGGATGGAAGATTTGTGTAAAATGTCATGGGAATCCCTTGAAGCTGAAATTGCAACGTGGAATCAAGTGGTTTGGCACTGCACCACCGTGCTTTTCAAGTCTGAAAGAAAACTTTATAAATCCATCTTCCCCGATCATCCCTCCATTTCTCAAAACTTGTTCTGCGATCTTGCACGACAAGTCATCGTCCATTTGCTCAACTTTGCACAGTGTGCTGTTCTAACAAAATGGACCACAGAGAAACTTTTCAAATTTCTAGATATGTACGAGACCCTGAGGGAAGACGTTATCGGAGGTTCCTATCTGGAGTCGGGAGCTAAGGAGCTGGCGTATGAGGCAGGCACCGCAAGGGACATGATAGTAGAGGCTATTATGGCCATGTTTTGTGATCTGAAGAACTCGATCAAGAACGACAACGAAAGGATTCCTGTTCCGAACGGTGCAGTGCACCCCTTGACTCGGTATGTAATGAACTATCTAAAATATGCATGCGAGTACAAGGATACGTTGGAGGAAGTGTTTGAACAAGGAGAAAGGATAAATGAGAAGGAGGTGAACGAAGTGGAAGATGTAGAGAAGCGGAAGAATTCGGGTTTTGCAGTGCAGTTGATGAGCATAATGGATCTTTTGGATGCAAATGTGGAAAGGAAATCACAGTTGTACAGGGACGATGCTCTGAGGTATTTTTTTCTGATGAACAACGGGAGATACGTAGTGCAGAAGGTGAAAGGGTGTGAGGAGCTTCACGAGCTGATGGGTGACAACTGGTGCAGGAGGAGGCAGTCGGGTCTGAGGTTGTACCACAAGTGTTATCAGAGGGAAACGTGGACTAAGGTGCTGCAGTGCCTGAAGCCGGAGGGGCTACAGCAGGGGACTGGGAATAAGGTCTCCAAACAGCTCGTGAAGGAAAGGTTCAAATGCTTCAATCGGATGTTTGAAGAGATACACAAGTGTCAGAGTTGTTGGATGGTGAGCGATCAACAACTGCAGTCGGAACTCAGAGTTTCCATCTCCTCTTTGGTCATCCCCGCCTACCGCTCCTTCGTTGGAAGATTCAAACAACATCTTGAATCAACCAGACACATCGACAAGTATATCAAGTACCACCCAGACGACATTGAGCTTTTGATTGATGATTTCTTTGCCGGTAATGCTGCCTCCATGCCTCGAAGGAGGTCATGA 1794 0.4727 MEMSSRMNEVEDVSPADGVPELAKELERMVDRYSSGRSNFVWEDEEAEDEDMSLLQFLDMVDRISAASASLSSSSSSSSSTVIAFQEELDLIAFVLEKAMSLLEKHLSHLLHDDPKSKPPNKSFSFNSPSYLSSVPESPSPRPPQQDHHTQDPFDFSPQKISTLNKIATAMISAGYHIECYLVFASFRRTAFRTTLHTFGFGNTRMEDLCKMSWESLEAEIATWNQVVWHCTTVLFKSERKLYKSIFPDHPSISQNLFCDLARQVIVHLLNFAQCAVLTKWTTEKLFKFLDMYETLREDVIGGSYLESGAKELAYEAGTARDMIVEAIMAMFCDLKNSIKNDNERIPVPNGAVHPLTRYVMNYLKYACEYKDTLEEVFEQGERINEKEVNEVEDVEKRKNSGFAVQLMSIMDLLDANVERKSQLYRDDALRYFFLMNNGRYVVQKVKGCEELHELMGDNWCRRRQSGLRLYHKCYQRETWTKVLQCLKPEGLQQGTGNKVSKQLVKERFKCFNRMFEEIHKCQSCWMVSDQQLQSELRVSISSLVIPAYRSFVGRFKQHLESTRHIDKYIKYHPDDIELLIDDFFAGNAASMPRRRS 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5247g00009 597 MobiDBLite consensus disorder prediction 1 21 - -
Vium5247g00009 597 PANTHER EXOCYST COMPLEX PROTEIN EXO70 24 586 IPR004140 GO:0000145|GO:0006887
Vium5247g00009 597 Gene3D Exocyst complex component Exo70 41 595 - -
Vium5247g00009 597 MobiDBLite consensus disorder prediction 130 156 - -
Vium5247g00009 597 Pfam Exo70 exocyst complex subunit 224 582 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vium5247g00009 597 SUPERFAMILY Cullin repeat-like 49 585 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5247g00009 Vium-Chr5247 46607 48885 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5247g00009 3 596 EXO70 exocyst subunit family AT5G13150 46.720 1.15e-175 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5247g00009 K07195 - pvu:PHAVU_007G000900g 949.888