Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5223g00001 ATGTCTTCCTCTTCACGCACACTCCTCTTCCTCTTCACGCTCTCCCTTCTCTTCTCCCTCATATACGCCCATGGCGGCCACGACGACGACGACGGCGGCGACGGTGAACCCGACTCCAACGAGGTTCCCGTTGACCTCCACTCGAGGACTTTGATCCTGGCGAAGGTGTGGTGTCTGATCGTGATCTTTTTGGCCACGTTCGTGTCTGGGGTGTCTCCCTATGTGTTGAAATGGAACGAGGGGTTCTTGGTTCTGGGGACCCAGTTCGCTGGAGGAGTGTTTCTGGGAACTGCCATGATGCATTTTCTCAGTGATGCTAACGAGACTTTCGGGGATTTGACTACCACAGAGTACCCTTTCGCGTTCATGCTGGCTTGTGCCGGCTATTTGCTGACCATGCTTGCTGATTCTGTCATTTCTTCGGTTTTAGCGAAGGTGGGGCGTGATGGAGATGCAGTAGATGTCGAAGTTCAAGGTTGGTACTCTGGCTTCTGCTTGTGTTGGCTCGTTGAATGGTATGCGAAAATGAAAATGTGA 537 0.5251 MSSSSRTLLFLFTLSLLFSLIYAHGGHDDDDGGDGEPDSNEVPVDLHSRTLILAKVWCLIVIFLATFVSGVSPYVLKWNEGFLVLGTQFAGGVFLGTAMMHFLSDANETFGDLTTTEYPFAFMLACAGYLLTMLADSVISSVLAKVGRDGDAVDVEVQGWYSGFCLCWLVEWYAKMKM 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5223g00001 178 PANTHER ZINC/IRON TRANSPORTER 54 144 - -
Vium5223g00001 178 Pfam ZIP Zinc transporter 53 145 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5223g00001 Vium-Chr5223 3192 4007 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5223g00001 7 159 Inorganic Solute Cotransporters AT5G59520 51.744 2.06e-48 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5223g00001 K14709 - gmx:100791239 209.534