Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5188g00008 ATGGATGAAACACAAGATCAGTATTATTCTTCCAGTCTACCTGAGATTTCTTTGTCTCGTGATGGTAGTGTGAGGTCTTATTCCAATGCGCAAATAAATCGTGGGACTGGGATGCCAGGCCTGAAGAAGAGAGGTCATGGAAGTCGGTCTTGGATTAAAATTGGTAACGATGGGAATTTTGAGACAGTGAGACTTGACAAGGCAACTATAATGAGAAATTGTTCTTTGCCTTCTAGAGATCTCCGGCTATTGGATCCAATGTTTATTTATCCTTCAGCAATATTAGGACGGGAGAAGGCTATTGTAGTCAACCTTGAGCAAATCCGATGTATAATCACTGCGGATGAGGTCATCCTGATGAATTCATTGGATGGTAGTGTTGGTCAGTACAGGTCAGAATTATGCAGTCGCCTTAAGAATGAAAAAGCTGATGATCTACCTTTTGAAATTAGGGCACTGGAGTTGGCTCTAGAATTGACATGCACATCTTTAGATGCTCAGGTAAACGAACTGGAAATGGAAATATATCCCGTGCTAGATGAACTAGCCTCATCTATCAGTACTCTAAATCTGGAACGTGTTAGGAGATTTAAAGGTCACCTGCTTGCTTTGACTCAACGAGTTCAGAAGGTTCGTGATGAAATAGAACATCTTATGGATGATGATGGTGACATGGCTGAGATGTGTCTAACTGAGAAAAAGAGAAGATCTGATACTTACACTATTAATGACTGTTTTCAAACTAATGCATCTGGTGGAGTGATTTCAAAGTCAGCTCCTGTTTCACCCGAGCGAACGACTAGTGGAGTCCAGATGTTGCAAAGGGCTTTCAGCAGCATTGGAAATTCTAGTAAACATGGTAGCTCAATGGTCTCTTCTGATAACGAGGAAAGGATTGAGCCACTCGAAATGTTGCTTGAAGCATATTTTGTACTCATTGATAATACTCTTAACACACTATTATCGCTCAAAGAGTACATTGACGACACAGAAGATTTTATCAACATAAAATTGGCAGCATTACTTTTCACTCTATTTATTACAGGGAAATATTCAAAACCAGCTAATACAGTTTGA 1077 0.3983 MDETQDQYYSSSLPEISLSRDGSVRSYSNAQINRGTGMPGLKKRGHGSRSWIKIGNDGNFETVRLDKATIMRNCSLPSRDLRLLDPMFIYPSAILGREKAIVVNLEQIRCIITADEVILMNSLDGSVGQYRSELCSRLKNEKADDLPFEIRALELALELTCTSLDAQVNELEMEIYPVLDELASSISTLNLERVRRFKGHLLALTQRVQKVRDEIEHLMDDDGDMAEMCLTEKKRRSDTYTINDCFQTNASGGVISKSAPVSPERTTSGVQMLQRAFSSIGNSSKHGSSMVSSDNEERIEPLEMLLEAYFVLIDNTLNTLLSLKEYIDDTEDFINIKLAALLFTLFITGKYSKPANTV 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5188g00008 358 Gene3D - 40 122 - -
Vium5188g00008 358 Gene3D Magnesium transport protein CorA, transmembrane region 126 341 - -
Vium5188g00008 358 CDD Mrs2_Mfm1p-like 51 340 IPR039204 -
Vium5188g00008 358 MobiDBLite consensus disorder prediction 29 48 - -
Vium5188g00008 358 FunFam Magnesium transporter MRS2-1 39 122 - -
Vium5188g00008 358 Coils Coil 201 221 - -
Vium5188g00008 358 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 31 338 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5188g00008 Vium-Chr5188 28764 35179 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5188g00008 1 339 MRS2 Gene Family AT2G03620 63.920 2.20e-136 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5188g00008 K16075 - gmx:100803935 597.43