Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5188g00007 ATGGATGAAACACAAGATCAGTATTATTCTTCCAGTCTACCTGAGATTTCTTTGTCTCGTGATGGTAGTGTGAGGTCTTATTCCAATGCGCAAATAAATCGTGGGACTGGGATGCCAGGCCTGAAGAAGAGAGGTCATGGAAGTCGGTCTTGGATTAAAATTGGTAACGATGGGAATTTTGAGACAGTGAGACTTGACAAGGCAACTATAATGAGAAATTGTTCTTTGCCTTCTAGAGATCTCCGGCTATTGGATCCAATGTTTATTTATCCTTCAGCAATATTAGGACGGGAGAAGGCTATTGTAGTCAACCTTGAGCAAATCCGATGTATAATCACTGCGGATGAGGTCATCCTGATGAATTCATTGGATGGTAGTGTTGGTCAGTACAGGTCAGAATTATGCAGTCGCCTTAAGAATGAAAAAGCTGATGATCTACCTTTTGAAATTAGGGCACTGGAGTTGGCTCTAGAATTGACATGCACATCTTTAGATGCTCAGGTAAACGAACTGGAAATGGAAATATATCCCGTGCTAGATGAACTAGCCTCATCTATCAGTACTCTAAATCTGGAACGTGTTAGGAGATTTAAAGGTCACCTGCTTGCTTTGACTCAACGAGTTCAGAAGGTTCGTGATGAAATAGAACATCTTATGGATGATGATGGTGACATGGCTGAGATGTGTCTAACTGAGAAAAAGAGAAGATCTGATACTTACACTATTAATGACTGTTTTCAAACTAATGCATCTGGTGGAGTGATTTCAAAGTCAGCTCCTGTTTCACCCGAGCGAACGACTAGTGGAGTCCAGATGTTGCAAAGGGCTTTCAGCAGCATTGGAAATTCTAGTAAACATGGTAGCTCAATGGTCTCTTCTGATAACGAGGAAAGGATTGAGCCACTCGAAATGTTGCTTGAAGCATATTTTGTACTCATTGATAATACTCTTAACACACTATTATCGCTCAAAGAGTACATTGACGACACAGAAGATTTTATCAACATAAAATTGGGAAATATTCAAAACCAGCTAATACAGTTTGAGCTGCTTCTTACAGCTGCTACATTGGTAGCTGCAGTATTTACTGCTGTAGCAGGTGTATTTGGAATGAACTTTGAAACCACAGTTTTTGACTATCCATCTGGATTCAATTTGGTTTTGGTAATTACTGGTATTGCTTGTATAGCATTGTATTTCGCTCTCCTATTTTATTTTAGGTACAAGAAAGTGCTTGCAGCTTAA 1245 0.396 MDETQDQYYSSSLPEISLSRDGSVRSYSNAQINRGTGMPGLKKRGHGSRSWIKIGNDGNFETVRLDKATIMRNCSLPSRDLRLLDPMFIYPSAILGREKAIVVNLEQIRCIITADEVILMNSLDGSVGQYRSELCSRLKNEKADDLPFEIRALELALELTCTSLDAQVNELEMEIYPVLDELASSISTLNLERVRRFKGHLLALTQRVQKVRDEIEHLMDDDGDMAEMCLTEKKRRSDTYTINDCFQTNASGGVISKSAPVSPERTTSGVQMLQRAFSSIGNSSKHGSSMVSSDNEERIEPLEMLLEAYFVLIDNTLNTLLSLKEYIDDTEDFINIKLGNIQNQLIQFELLLTAATLVAAVFTAVAGVFGMNFETTVFDYPSGFNLVLVITGIACIALYFALLFYFRYKKVLAA 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5188g00007 414 Gene3D Magnesium transport protein CorA, transmembrane region 352 412 - -
Vium5188g00007 414 MobiDBLite consensus disorder prediction 29 48 - -
Vium5188g00007 414 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 31 412 IPR039204 -
Vium5188g00007 414 FunFam Magnesium transporter MRS2-1 39 122 - -
Vium5188g00007 414 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 351 402 IPR045863 -
Vium5188g00007 414 CDD Mrs2_Mfm1p-like 51 411 IPR039204 -
Vium5188g00007 414 Coils Coil 201 221 - -
Vium5188g00007 414 Gene3D - 40 122 - -
Vium5188g00007 414 Gene3D Magnesium transport protein CorA, transmembrane region 126 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5188g00007 Vium-Chr5188 28688 35179 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5188g00007 1 412 MRS2 Gene Family AT2G03620 63.765 3.88e-175 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5188g00007 K16075 - gmx:100803935 716.842