Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5162g00024 ATGAGGAGCATACCCACCACGACAACCTCAACTTCAACCGCACCCACAGCCGCCACGTCATCATTAACCACTCCTCCGCACCCCACGTGGCACTCTCCCGTTCCGTACTTGTTCGGAGGACTCGCCGCCATGCTTGGTCTCATAGCCTTCGCTCTCTTGATCTTGGCTTGCTCCTACTGGAAAATTTCTGGTGCGTTGGAGAACGAGGAGAACCGTGAAAGGAACATGGAGAACGGCGGCGGTGAGAAACAGGGTGATTCTGAGAACAAGGAATCTGTTACCGTGTACGAGGATAAGATTCTGGTCATTATGGCTGGAGATGAGAAACCCACATTCTTGGCCACCCCCAAAGCCTCCTCTGTTTCTCGTCCACTTCCCAGCCATTTTGAGCACAGCCTCCAACACCACGTGACTACTGAGAAATCAGAGAAAGAAATGGAAACCCAACAACAACAACAGAGTCAGCTATCTTAA 474 0.5148 MRSIPTTTTSTSTAPTAATSSLTTPPHPTWHSPVPYLFGGLAAMLGLIAFALLILACSYWKISGALENEENRERNMENGGGEKQGDSENKESVTVYEDKILVIMAGDEKPTFLATPKASSVSRPLPSHFEHSLQHHVTTEKSEKEMETQQQQQSQLS 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5162g00024 157 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 8 152 IPR040359 GO:0080143
Vium5162g00024 157 MobiDBLite consensus disorder prediction 66 92 - -
Vium5162g00024 157 MobiDBLite consensus disorder prediction 129 147 - -
Vium5162g00024 157 MobiDBLite consensus disorder prediction 115 157 - -
Vium5162g00024 157 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5162g00024 Vium-Chr5162 156701 157625 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5162g00024 26 122 Glutamine Dumper (GDU) Family AT5G57685 61.616 1.10e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5162g00024 - - pvu:PHAVU_009G085200g 184.496