Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5160g00006 ATGGAACAGTTGGATTTTCATCCATTCAGTTTAAATCAAGATATGAATCACAACCAAGTTGGTCACAACTCTGATTTGAATGGTCAAGTGGATTTATATCAGGACCTCGGGCATAACACAGAAATTAAACACTCAGAATCAAATCAATTTAGCATAGAAGGTTTTGATTGTAGCCAATTCTTTGGAGCTGAGGATACTGTGCATCATGGAAAAAACATTATACCTAACATTCTTCCAAATATCTGCCCTCCACCATCTGCTTTCTTAGCTCCAAAATGTGCCCTGTGGGACTGTTTCAGACCCGCTCAAGGGGTAGAATGGTGCAGGAACTACTGTAGCAGTTGTCATGAGCTGTTGGCAAATAATGAAGGTCTTCCTGGCATGACTCCAATTTTACGACCAGGGGGCATTGGTGTAAAAGATGGTCCTTTGTTTGCTGCTGTTCTTGCGAAGACCCAGGGAAAGGAAGTGGGCATCCCCAGTTGTGAAGGCGCCGCATCAACTAAATCTCCCTGGAATGCTCCAGAGTTCTTTGATCTTTCTTTTCTTGAGGGTGAAGCTATTAGGGAGTGGCTATTCTTTGACAAGCCTAGAAGGGCATTTGAAAGTGGAAACAGAAAACAAAGATCACTTCCAGATTACAGCGGACGCGGTTGGCATGAGTCAAGGAAGCAGGTGATGAAAGAACATGGAGGACAAAAGAGGTCCTATTACATGGACCCCCAGCCTCTTAGTTATCTGGAGTGGCATTTGTACGAGTATGAGATCAACAACCACGATGGTTGTGCATTATACAGACTAGAATTAAAGCTTGTTGAGAAAAAGAAAAGTCCTAAAGGAAAAGTGACCAAGGAATCTCTTAATGATTTACAGAACAAGATGGGACAGCTTACTGCTGCTGTTCTATCATCTGATGATGGAATACCCATCAAGGGAAAAACAAATGCCAAGTCTGAGAATGATGGATCTCCAGAAAATTAA 981 0.423 MEQLDFHPFSLNQDMNHNQVGHNSDLNGQVDLYQDLGHNTEIKHSESNQFSIEGFDCSQFFGAEDTVHHGKNIIPNILPNICPPPSAFLAPKCALWDCFRPAQGVEWCRNYCSSCHELLANNEGLPGMTPILRPGGIGVKDGPLFAAVLAKTQGKEVGIPSCEGAASTKSPWNAPEFFDLSFLEGEAIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLYEYEINNHDGCALYRLELKLVEKKKSPKGKVTKESLNDLQNKMGQLTAAVLSSDDGIPIKGKTNAKSENDGSPEN 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5160g00006 326 PANTHER TRANSCRIPTION FACTOR VOZ1 2 320 IPR039277 GO:0006355|GO:0048578
Vium5160g00006 326 MobiDBLite consensus disorder prediction 304 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5160g00006 Vium-Chr5160 76917 78909 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5160g00006 20 299 VOZ-9 Transcription Factor Family AT1G28520 63.214 9.28e-126 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Vium5160g00006 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5160g00006 - - vum:124840086 689.108