Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5160g00004 ATGATGAGAGAAAGTTCCAAGGGCAAGTTTGGATCCTCTTCTATTCAATCCATGAAGGAGAAGGAAAAACACCTGGTGGATAAAATTCAAGGGATTTTCAGCAATCTTCAGTGTGCAAGAAAAGAGGGCAGGGGTAGTGACATTGTGATCTTTGAGGAGCAGATGCATCAGCTTCTCCGCGAGTGGAAGGCGGAACTGGAGTCTCCAGCCACCTCCTTAGCTGATGGAAGCTTTGATTCGTTTACCAGTGAACTTGCCCAACTGTTGCAAGTGATTGAGGAGAAAGATGATGCAACTAGTCCATTAACAAAACCTGGGCCGTTGAAGACTGAGCTCCAAACAAGTAACATTAATGACAACAATTTTCAGTTTTTTCAGGAGAAACATTTTGATGATAACCAACCTCTAGGTCATAATTTCGAAGGCTCTGCTTCAACTGTGTACAACAATGCTTTTAATAACTCAGATATGGAACAGTTGGATTTTCATCCATTCAGTTTAAATCAAGATATGAATCACAACCAAGTTGGTCACAACTCTGATTTGATTGGTCAGGTGGATTTATATCAGGACCTCGGGCATAACACAGAAATTAAACACTCAGAATCAAATCAATTTAGCATAGAAGGTTTTGATTGTAGCCAATTCTTTGGAGCTGAGGATACTGTGCATCATGGAGAAAACATTATACCTAACATTCTTCCAAATATCTGCCCTCCACCATCTGCTTTCTTAGCTCCAAAATGTGCCCTGTGGGACTGTTTCAGACCCGCTCAAGGGGTAGAATGGTGCAGGAACTACTGTAGCAGTTGTCATGAGCTGTTGGCAAATAATGAAGGTCTTCCTGGCATGACTCCAATTTTACGACCAGGGGGCATTGGTGTAAAAGATGGTCCTTTGTTTGCTGCTGTTCTTGCGAAGACCCAGGGAAAGGAAGTGGGCATCCCCAGTTGTGAAGGCGCCGCATCAACTAAATCTCCCTGGAATGCTCCAGAGTTCTTTGATCTTTCTTTTCTTGAGGGTGAAGCTATTAGGGAGTGGCTATTCTTTGACAAGCCTAGAAGGGCATTTGAAAGTGGAAACAGAAAACAAAGATCACTTCCAGATTACAGCGGACGCGGTTGGCATGAGTCAAGGAAGCAGGTGATGAAAGAACATGGAGGACAAAAGAGGTCCTATTACATGGACCCCCAGCCTCTTAGTTATCTGGAGTGGCATTTGTACGAGTATGAGATCAACAACCACGATGGTTGTGCATTATACAGACTAGAATTAAAGCTTGTTGAGAAAAAGAAAAGTCCTAAAGGAAAAGTGACCAAGGAATCTCTTAATGATTTACAGAACAAGATGGGACAGCTTACTGCTGCTGTTCTATCATCTGATGATGGAATACCCATCAAGGGAAAAACAAATGCCAAGTCTGAGAATGATGGATCTCCAGAAAATTAA 1449 0.4244 MMRESSKGKFGSSSIQSMKEKEKHLVDKIQGIFSNLQCARKEGRGSDIVIFEEQMHQLLREWKAELESPATSLADGSFDSFTSELAQLLQVIEEKDDATSPLTKPGPLKTELQTSNINDNNFQFFQEKHFDDNQPLGHNFEGSASTVYNNAFNNSDMEQLDFHPFSLNQDMNHNQVGHNSDLIGQVDLYQDLGHNTEIKHSESNQFSIEGFDCSQFFGAEDTVHHGENIIPNILPNICPPPSAFLAPKCALWDCFRPAQGVEWCRNYCSSCHELLANNEGLPGMTPILRPGGIGVKDGPLFAAVLAKTQGKEVGIPSCEGAASTKSPWNAPEFFDLSFLEGEAIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLYEYEINNHDGCALYRLELKLVEKKKSPKGKVTKESLNDLQNKMGQLTAAVLSSDDGIPIKGKTNAKSENDGSPEN 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5160g00004 482 PANTHER TRANSCRIPTION FACTOR VOZ1 2 476 IPR039277 GO:0006355|GO:0048578
Vium5160g00004 482 MobiDBLite consensus disorder prediction 460 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5160g00004 Vium-Chr5160 71413 75206 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5160g00004 1 455 VOZ-9 Transcription Factor Family AT1G28520 51.528 1.40e-156 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Vium5160g00004 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5160g00004 - - gmx:100808629 867.07