Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5155g00004 ATGATGTGTGTTGGAATTTTGATTTCATTTGTTATCATATTCTTAACAAAAGCACTGAGATGGGTTTGGTTGGAACCGAAAAGGGCAGAGAGATTCCTCAGAAGACAAGGCATAAAGGGAAACCCATATAAGTTTTTCTTCGGAGACATGAAAGCAATGGGCATGATGCTGCATCAAGCACAATCTAAACCCATACAAATCGACGATGATGTTGCAAGTCGCCTGGTTCCATTTCAAAATCAATTGGTCAAAGAATGTGGTAAGAATTCGTTTTTCTGGTATGGGCCTAAGATTGCAGTGAATATTATGGAGCCTGAAGCAATAAAGGAGATTCTGAACATGATAAATGACTTTCCAAAGCCAACCCTTAATCCACTTGTCAAGTTACTGATAACAGGACTTCTAGATCTTGAGGGAGACAAATGGTCAAAGCACAGAAAGATCATCAACCCTGCATTTAATCTCGTTAAGCTCAAGCTTGTGTTGCCTGCCATGTATGATAGTTGCAACCAGATGATGAAGGAATGGAAGATGTCAGTGTGCGAAACAGGATCATGTGTGGTAGATGTCTGGCCATTCTTAAACAACTTGACAGCTGATGTGATTTCTCGTACAGCTTTCGGAAGTAACTATGAAGAAGGAAAAATAGTATTTCAACTCCTAAAAGAACAAGCTCAACTTACATCCAAGGTCTTTCAATCTATTTATATTCCAGGGTGGAGATTTTTACCAACGAAATTGAATAAGAGGATGAAGAAGATTGACTACGAAATTGGAAACGTACTTCATGGAATTATCCAAAAGCAAGAGGGTATTATGAAAACATGCGAAGCTTCCAATGATAACTTATTAGGGCTACTATTGGAATCCAATCAAAAAGAGATTGAAGATCAAGGACTTAAGAAAGATTTTGGAATGAACACCAAGGATGTAATTAACGAATGTAAGTTGTTTTACTTTGCTGGACAAGAAACAACATCGGTGCTACTAAATTGGACGATGGTGTTATTGAGTAGATTTCCCAAATGGCAAACACTGGCAAGAGAAGAAGTCATTGAAATTTTTGGCACAAAAGAACCAGACTATGATGGATTAAATCGTCTTAAAGTTGTCACAATGATTTTGTATGAGGTTTTAAGATTATACCCACCGGCTACTGTTATTACAAGAGTCATAAGGAAAGAAACTACAGTTGGAGATATGACTTTACCAACAGGAGCACTAGCTTCTATTCCAATTGTGTTGGTACATCATGATTTTGAATTATGGGGAAGTGATGCAAAGGAGTTCAAACCAGAAAGATTCTCAGAAGGAATCTCAAAAGCAACAAATGGTAAAGTTTCATTTATCCCATTTGGATGGGGTCCTCGAATATGCATTGGCCAAAACTTTGCTTTGCTTGAAGCCAAAATGGCATTGTCTCTAATTCTGCAAAACTTCAAATTTGAGCTATCTTCCTCCTATGTTCATGCTCCAATTACAGTCATAACTGCTCAACCTCAATTCGGCACGCACCTTATGTTACAAAAGTTATAG 1536 0.3776 MMCVGILISFVIIFLTKALRWVWLEPKRAERFLRRQGIKGNPYKFFFGDMKAMGMMLHQAQSKPIQIDDDVASRLVPFQNQLVKECGKNSFFWYGPKIAVNIMEPEAIKEILNMINDFPKPTLNPLVKLLITGLLDLEGDKWSKHRKIINPAFNLVKLKLVLPAMYDSCNQMMKEWKMSVCETGSCVVDVWPFLNNLTADVISRTAFGSNYEEGKIVFQLLKEQAQLTSKVFQSIYIPGWRFLPTKLNKRMKKIDYEIGNVLHGIIQKQEGIMKTCEASNDNLLGLLLESNQKEIEDQGLKKDFGMNTKDVINECKLFYFAGQETTSVLLNWTMVLLSRFPKWQTLAREEVIEIFGTKEPDYDGLNRLKVVTMILYEVLRLYPPATVITRVIRKETTVGDMTLPTGALASIPIVLVHHDFELWGSDAKEFKPERFSEGISKATNGKVSFIPFGWGPRICIGQNFALLEAKMALSLILQNFKFELSSSYVHAPITVITAQPQFGTHLMLQKL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5155g00004 511 Pfam Cytochrome P450 78 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5155g00004 511 CDD CYP72 76 507 - -
Vium5155g00004 511 Gene3D Cytochrome P450 22 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5155g00004 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Vium5155g00004 511 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5155g00004 511 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5155g00004 511 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5155g00004 511 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5155g00004 511 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5155g00004 511 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5155g00004 511 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5155g00004 511 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5155g00004 511 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5155g00004 511 PANTHER CYTOCHROME P450 FAMILY MEMBER 15 503 - -
Vium5155g00004 511 FunFam Cytochrome P450 734A1 23 511 - -
Vium5155g00004 511 SUPERFAMILY Cytochrome P450 74 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5155g00004 Vium-Chr5155 25646 35869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5155g00004 2 511 Cytochrome P450 AT3G14690 54.403 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5155g00004 - - vun:114168189 901.353