Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5146g00010 ATGGAGTTGTGTGTGATAAGAACAAATCGAGGCCTAGTTAAGCCAGGGAAGGAGACTCCCTTGAGCACACTAGATTTGTCAGTGATCGATAGGTTACCTGTTCTAAGATGCAATGCTCAAACCTTGCATGTGTTCAAACACGGTCCTCAAGCAACAAGGGTGATAAAAGAGGCCCTCTCCAAAGCACTCGTTCCCTATTACCCTCTTGCGGGGAGACTCAAAGAATCGGAAATAGGGTGCCTTCAAATTGAGTGCTCAGGTGATGGAGTCTGGTATGTTGAAGCATCTTCTCGTTGCACACTTCACTCTCTTGATTTCTTTCATGATCTTCACTCTATTCCTTATCACGATCTTCTTCCTGATGCTGTTCCCGAGACCCAAGGCATCCAACCCCTCGTGCAAATGCAGGTGACACAATTTAGTTGCGGGGGTTTTGTGATAGGCCTCATATTCTGCCACAGCATATGCGATGGTCTTGGTGCTGCACAGTTTCTAAATGCAGTAGGGGAACTAGCTAGGGATCTTGAGAAACCTAGCATTGAACCAGTGTGGCACAGGAACTTCTTTCCACCTTCTCAAACCCCCCAAAAAACTGCATTACCACCAACACCACTCGCTCCTCCTCAAATGCCAGACTACAAACTACAGCATGCTAACATAGACATGCCCCTGGATCAAATCAACCGTCTGAAAAGAGAATTTCAACAAGTGACTGGACTCAATTGCTCGACCTTCGAGATTGTTGCAGCAGCATGCTGGACCAGTCGAACAAGGGCCATTCGATTCGAGCCAAATACGGAACTGAAGCTAGTTTTCTTTGCAAATTGCCGTCAACTGTTGGACCCAGCTCTGCCCAATGGCTTCTACGGCAATTGTTTCTTTCCAGTGACGATCACGGCTTCGTGTGAGTCACTTAGAAATGCAACAACGGTTGGTGTGGTGAAGCTGATACAAGAAGCGAAGGCCAAGTTAGGCGTGGAATTTGACAAATACTTGAAGGGCGAGCATTTGAATAATGGATAAGACCCTTTTGCGCCTCCACTCACCTACACCACTATGTTCGTATCTGAATGGGGAAGGCTCGGATTCAACCACGTGGACTACCAGTGGGGCCCACCCGTCCACGTGGTTCCCATCCAAGGGTCTAGCATTATACCAGTTGCCATTGTGGGGTCCATGCCTCTTCCCAAGAAAGGGATTCGTTTGATGACGTGGTGCGTGGAGGAGGCACATCGCGTTTCTTTCCTCCATGAGATGGATGGGGTGATGAACGAGGGACTGAGTATGTAA 1290 0.4814 MELCVIRTNRGLVKPGKETPLSTLDLSVIDRLPVLRCNAQTLHVFKHGPQATRVIKEALSKALVPYYPLAGRLKESEIGCLQIECSGDGVWYVEASSRCTLHSLDFFHDLHSIPYHDLLPDAVPETQGIQPLVQMQVTQFSCGGFVIGLIFCHSICDGLGAAQFLNAVGELARDLEKPSIEPVWHRNFFPPSQTPQKTALPPTPLAPPQMPDYKLQHANIDMPLDQINRLKREFQQVTGLNCSTFEIVAAACWTSRTRAIRFEPNTELKLVFFANCRQLLDPALPNGFYGNCFFPVTITASCESLRNATTVGVVKLIQEAKAKLGVEFDKYLKGEHLNNGXDPFAPPLTYTTMFVSEWGRLGFNHVDYQWGPPVHVVPIQGSSIIPVAIVGSMPLPKKGIRLMTWCVEEAHRVSFLHEMDGVMNEGLSM 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5146g00010 429 Gene3D - 2 200 IPR023213 -
Vium5146g00010 429 Pfam Transferase family 8 380 - -
Vium5146g00010 429 Gene3D - 201 415 IPR023213 -
Vium5146g00010 429 PANTHER ACYL TRANSFERASE 4 4 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5146g00010 Vium-Chr5146 65801 68390 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5146g00010 12 385 Monolignol Biosynthesis Gene Families AT5G48930 28.750 2.57e-37 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5146g00010 - - gmx:100783128 701.819