Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5135g00007 ATGGCTACCATTTCACTCAGGCATAACCCTCAAGTGAACAACACCAACCAGCAACGTGAAATCATCACCGAAGAGATCCAAGGACTCATTAGAGTCCACAGAGATGGACGTGTAGAGAGACCACCGATTGTGCCTACTGTCTCCTGCACAGTATCATCATCATCATCGTCTTCAAGTGCCAAAGATGTTACCATCAACAAAGAGACCAACTTATGGGCACGTGTTTACGTGCCTTCAATGAGTTATCACACAAAGGCTCTTCCTTTGCTTGTGTACTTCCACGGTGGTGGATTCTGTGTTGGTTCCGCTGCTTGGAGCTGTTACCACGAGTTCTTGACCAACCTTGCTTTCAAATCAAACTGTGTCATTCTCTCTGTGGATTATCACTTAGCCCCAGAGAATCGTCTTCCCGTGGCATACGATGACGGTTTCAACGCTCTCGCGTGGGTCAAAAGAGAAGCACAGAACATCTCCGGTGCGCAAAAGTGGTGGCTGACTCACTGCGACATGTCTTCCGTTTTCCTCGCTGGTGATAGTGCAGGCGCCAACATAGCTTATAATGTGGCCACCCGCATGGGATCATCATCATCATCAAACACGACGACACCATTATCCCTCAAGGGTGTCATACTGATCCAACCTTTCTTCGGAGGAGAAGAAAGAACTAGCTCTGAGAAGCATTTCCTTCAGCCACCCAATTCGGCGCTCACTTTATCCGTTTCCGACACTTACTGGCGCTTGGCGCTTCCTCTCGGAGCCACCCGTGACCACCCATATTGCAACCCTCTTGCACATGGCACGGTCAAGTTGAGAGATTTGAGGGTTTCTTCCATTATGGTGTGCGTTTCAGAAATGGATATACTGAAAGATAGGAACTTGGAGTTCTCAAAAGCTTTGGCTAAAGCAGGAAAAAGGGTTGAAACAGTTATTTTCAAAGGCGTAGGCCATGCCTTCCAAGTGCTGCATAATTACCAGCTTTCACATTCCCGAACCCAAGAAATGATAACCCATATCAGAAACTTCGTTAACCAGTAA 1035 0.4734 MATISLRHNPQVNNTNQQREIITEEIQGLIRVHRDGRVERPPIVPTVSCTVSSSSSSSSAKDVTINKETNLWARVYVPSMSYHTKALPLLVYFHGGGFCVGSAAWSCYHEFLTNLAFKSNCVILSVDYHLAPENRLPVAYDDGFNALAWVKREAQNISGAQKWWLTHCDMSSVFLAGDSAGANIAYNVATRMGSSSSSNTTTPLSLKGVILIQPFFGGEERTSSEKHFLQPPNSALTLSVSDTYWRLALPLGATRDHPYCNPLAHGTVKLRDLRVSSIMVCVSEMDILKDRNLEFSKALAKAGKRVETVIFKGVGHAFQVLHNYQLSHSRTQEMITHIRNFVNQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5135g00007 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 173 185 IPR033140 -
Vium5135g00007 344 Pfam alpha/beta hydrolase fold 90 319 IPR013094 GO:0016787
Vium5135g00007 344 Gene3D alpha/beta hydrolase 28 344 IPR029058 -
Vium5135g00007 344 SUPERFAMILY alpha/beta-Hydrolases 60 333 IPR029058 -
Vium5135g00007 344 PANTHER ARYLACETAMIDE DEACETYLASE 25 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5135g00007 Vium-Chr5135 59102 60348 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5135g00007 1 343 Carbohydrate Esterase AT5G16080 53.125 1.87e-126 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5135g00007 - - gmx:100819429 553.518