Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5067g00007 ATGGCGGTAGGACTCTCCGCCGCCATAACCTTGAAGCCCTTCCTCCGCTACCACCATCCCCACTTTCCCAAACCAATTCCAGCCACACTTCCTTTCTCTCCCTTGAGAAATTCCCACCACACAACCTTCTTGAAGACCCAAAAGTTGTCACCTTTCACTGTCTCTGTCCTAACGCAGGACCCCAAAAAAAGCACCCACATGGAAATTGAGGACCAGGAGCAGCCATCACCCTCTCCTCCCCAAGTCTTGTCACCAAAGTTGGCGGAGAAGTTGGCCAGAAAAGAGTCCGAGAGGTTCACCTACCTCGTCGCTGCTGTCATGTCCAGCTTCGGGGTCACATCCATGGCAGTGCTCGCTGTTTATTACAGATTCGCGTGGCAAATGGAGGGTGGAGAAGTGCCTTGGTCTGAAATGTTTGGCACATTTGCTCTGTCAGTGGGTGCTGCTGTGGGTATGGAGTTTTGGGCTAGATGGGCTCATAAAGCTCTCTGGCATGCTTCCTTGTGGCACATGCATGAGTCCCACCATCGACCAAGAGAAGGACCCTTCGAACTGAACGATGTATTTGCCATAATCAATGCTGTCCCTGCCATCGCTCTCCTTTCCTACGGTTTCTTTCACAAGGGACTCTTCCCTGGTCTTTGCTTCGGTGCGGGTCTTGGAATTACTGTCTTTGGGATGGCCTACATGTTTGTACACGATGGCTTGGTTCATAAGAGATTCCCTGTGGGCCCCATTGCCAACGTGCCCTATTTAAGAAGAGTGGCTTCTGCTCACCAACTTCACCATTCAGAAAAATTTGATGGTGTGCCGTATGGGCTGTTTATGGGACCAAAGGAAGTTGAAGAAGTGGGAGGGCTAGAAGAGCTGGAGAAAGAGATAAGTAGGAGAGCAAGATTATACAAAAACAGTTCATCATAA 921 0.5005 MAVGLSAAITLKPFLRYHHPHFPKPIPATLPFSPLRNSHHTTFLKTQKLSPFTVSVLTQDPKKSTHMEIEDQEQPSPSPPQVLSPKLAEKLARKESERFTYLVAAVMSSFGVTSMAVLAVYYRFAWQMEGGEVPWSEMFGTFALSVGAAVGMEFWARWAHKALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSYGFFHKGLFPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYLRRVASAHQLHHSEKFDGVPYGLFMGPKEVEEVGGLEELEKEISRRARLYKNSSS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5067g00007 306 Pfam Fatty acid hydroxylase 148 275 IPR006694 GO:0005506|GO:0008610|GO:0016491
Vium5067g00007 306 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 302 IPR045019 GO:0016491
Vium5067g00007 306 MobiDBLite consensus disorder prediction 63 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5067g00007 Vium-Chr5067 61748 64346 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5067g00007 1 218 Chloroplast and Mitochondria Gene Families AT4G25700 58.407 1.05e-87 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5067g00007 K15746 - gmx:100785541 522.702