Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5037g00002 ATGAGAACAATTTGCCGGGAGCCAAAAACGCAGTCGTTCACCTTCTCCCGTCACACTTCGGCACCAAGTTCATCTCTATCCACAACACCTTCGACCAGCACCAAAGAAAACATGGTTTCCACTACCATAGAGGAAGCAGAAGCTCTGATACTAAAATGGGACCCTGAAACCTCCGCGTACGGAAGAGTAACCTCTCTCTTCTACAACGACAAAGCTGAGGCCATGCACTACATCCACTGCGTTAACCAGCTTCATAAAACCATGCACGCTTTGCTTGCACAGAACCCGTCTTCACGGAAACTCGTCTTCGCACAAAAACTTATGCAAATGGCCATGAAGAGGCTCCAGAAAGAGTTTTACCAGATATTATCCATGAGCCGGGCCCAACTCGACCCCGAATCCGTTTCCGCCAGATCCTCCACCACCTCTAGAACCTCTTTCTGTTCCGATAGCTACGATGAAGGCACGGCGGAAGACGACGTTCGCGACACAGGAGATTGTATCTCCGAAGTCGAACGCGTTTCCTCTGAAACCGTGGCGGTTCTCAAATCCATTGCCGACTGCATGGTTTCCAACGGTTATGGCAAGGAATGCGTCACCGTTTACACGACTATGAGAAAGTCGATCGTCGACGAAGGCGTGTATCGCTTAAGTGTGGAGGAATTGAGCGCTTCGAAGGTGAATAAGATGGACTGGGAAGTGCTCGAGTTGAAAATCAAGGGTTGGTTAGAGGCGGTTAAGATCGCCGTGAGGACGCTCTTCTCTGGAGAAAGGATCCTCTGCGATCAAGTCTTCGGTGCGTCACAATCCATCGCGGAAGCTTGCTTTGCCGAAATTTCGAGAAGCGGAGCCGCTCTACTGTTCGGATTCCCCGATCTCGTTGTGAGAACGAAAAAATCCCCGCCTGAGAAGATCTTCCGAATAATTGATATGTACGCCACGATCGCTTCACTGTGGCCGGAGATTGAATCGATATTCTCGTACGATTCAACAACCGCGTCTAAATCTCAAGCCTACGCTCTGCTTCTCCGACTCTCTGAGTCCGTACGAACGAGTTTCTTTGAAATTGAGACCGCAATTCAGAAAGACTCTTCCAAAGCTATTTCAAAATTCGCCGGCGTCCATCCCCTGACCGTGCAAGTAATGAATCACTTGTCTACACTCGCTGATTACAGCATCGTGCTATCTGAAATTTTCTTCGACGTGCCGCCGTCATCGAGGTCGCCGTTACCGGAATCTTACTTGTACAGTCCACAATCTGACAACTCCACGACAACGGCGACGGAATTCTCGGTGCAGATGGCGAGGCTGATTCTAGTCCTTCTTTGCAAGATCGACGGCAAGTCGAGGCATTGCAAGGAGGTTTCGTTATCTTACCTGTTTCTCACAAACAATCTCCGGCACGTGGTAGCCAAGGTCCGAACCTCGAACTTGATTTACGTTGTCGGCGACGACTGGGTTTTGAATCACGAGGCAAAGGTGAAGAAGTTGATGGCAAACTACGAGAGAGTAGCATGGGGGAAAGTGCTTTCGTCTTTGCCGGAAAATACAGCGGCGGAAATGTCGCCGGCGGAAGCGAGGGCTATGTTCGGGAATTTCAATTTAGAATTCGAGAAAGCTTACCGGAAAGAGAACGCGTTTAACATTCCGGAGCAGGAATTTCGTGAAGAGACGAAGGCGTCACTCGCAAGAAAAATAAGCCCTATGTACCGCGAGATGTATGAAACGCTCCGTAATTCAGTGGGATCGGTGAGGGAAATGAGAGACTATGTCATATTTACCCCTGAAGATGTTGAGAATTACATGCTGAACCTTTTTCCCGCGGGAAGATCAAGCTCCACTGAAGAAAACAGTTCATTTTTTGTAAGAAAAAAATTCTGTAAGAAATGCAAATGA 1896 0.4863 MRTICREPKTQSFTFSRHTSAPSSSLSTTPSTSTKENMVSTTIEEAEALILKWDPETSAYGRVTSLFYNDKAEAMHYIHCVNQLHKTMHALLAQNPSSRKLVFAQKLMQMAMKRLQKEFYQILSMSRAQLDPESVSARSSTTSRTSFCSDSYDEGTAEDDVRDTGDCISEVERVSSETVAVLKSIADCMVSNGYGKECVTVYTTMRKSIVDEGVYRLSVEELSASKVNKMDWEVLELKIKGWLEAVKIAVRTLFSGERILCDQVFGASQSIAEACFAEISRSGAALLFGFPDLVVRTKKSPPEKIFRIIDMYATIASLWPEIESIFSYDSTTASKSQAYALLLRLSESVRTSFFEIETAIQKDSSKAISKFAGVHPLTVQVMNHLSTLADYSIVLSEIFFDVPPSSRSPLPESYLYSPQSDNSTTTATEFSVQMARLILVLLCKIDGKSRHCKEVSLSYLFLTNNLRHVVAKVRTSNLIYVVGDDWVLNHEAKVKKLMANYERVAWGKVLSSLPENTAAEMSPAEARAMFGNFNLEFEKAYRKENAFNIPEQEFREETKASLARKISPMYREMYETLRNSVGSVREMRDYVIFTPEDVENYMLNLFPAGRSSSTEENSSFFVRKKFCKKCK 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5037g00002 631 MobiDBLite consensus disorder prediction 1 37 - -
Vium5037g00002 631 Pfam Exo70 exocyst complex subunit 242 603 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vium5037g00002 631 Gene3D Exocyst complex component Exo70 63 615 - -
Vium5037g00002 631 PANTHER EXOCYST COMPLEX PROTEIN EXO70 31 606 IPR004140 GO:0000145|GO:0006887
Vium5037g00002 631 MobiDBLite consensus disorder prediction 134 157 - -
Vium5037g00002 631 MobiDBLite consensus disorder prediction 134 152 - -
Vium5037g00002 631 SUPERFAMILY Cullin repeat-like 42 606 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5037g00002 Vium-Chr5037 34724 37017 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5037g00002 42 606 EXO70 exocyst subunit family AT3G09520 50.960 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5037g00002 K07195 - gmx:100798477 940.258