Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium497g00006 ATGGCCTCAAGCTCAGTTTGGACAACAAAGCAGAACAAGAAGTTTGAGAATGCTTTGGCCATCTATGACAAGGACACCCCAGATCGGTGGCAGAACTTGGCCAGGGCAGTGGGAGGAAAAACAGTGGAAGAAGTGAAAAGGCACTATGAGATGCTTGTTGATGATTTGAAGCAGATTGAAGAAGGTCGTGTGCCCTTGCCCAATTACAGAAAAGTTGCTGCAACAGAAGCAGGCAGCATCAGAGGTTACAGTTACATGAATGAAGAACAAAGGATGAAAGTCCTAAGCCTCAGGTGA 297 0.4613 MASSSVWTTKQNKKFENALAIYDKDTPDRWQNLARAVGGKTVEEVKRHYEMLVDDLKQIEEGRVPLPNYRKVAATEAGSIRGYSYMNEEQRMKVLSLR 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium497g00006 98 FunFam Transcription factor SRM1 1 66 - -
Vium497g00006 98 SMART sant 3 55 IPR001005 -
Vium497g00006 98 SUPERFAMILY Homeodomain-like 5 60 IPR009057 -
Vium497g00006 98 CDD SANT 7 53 IPR001005 -
Vium497g00006 98 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 76 IPR044636 GO:0003700
Vium497g00006 98 Gene3D - 1 66 - -
Vium497g00006 98 ProSiteProfiles SANT domain profile. 2 52 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium497g00006 Vium-Chr497 51317 52612 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vium497g00006 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium497g00006 - - gmx:100804049 182.956