Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium4942g00002 | ATGCACACACTTGGGATATTGACTCAATCTCGACCAAATGGCTTAGTAGTCCCAGATGCTAGCTTGTTCCCAGTGAAATTACCTTCAGATGTTATTAAGCTAATGGAAATTGGACTTAAAAATAGAGCCATTGCTGCAACTGCTATGAATGAACGAAGTAGTCGTTCTCACAGTGTTGTCTCAGTTCACGTTACCGGGAAGGACTTAAAGACTGGTTGCACTATGGCTGGTAATCTTCATTTGGTAGATTTGGCTGGAAGTGAAAGAGTAGATCGTTCTGAAGTAATTGGGGATAGGCTCAAAGAAGCACAGCATATAAACAGATCACTAGCTGCCCTTGGAGATGTTATTTTTTCCCTTTCTCAAAAGAGCTCTCATGTACCATACAGAAACAGCAAGCTTACTCAACTTCTACAAACTTCTCTTGGTGGTCAAGCAAAGACGCTCATGTTCGTCCAAATCAATTCAGACGTAAGTTCATATTCTGAAACTCTGAGCACTTTAAAGTTTGCTGAGAGGGTTTCTGGAGTTGAATTAGGAGCTGCACGAAGTAACAAAGAGGGCAAAGACTTTAGAGAAATGATGGAACAGGTGTCTTCTTTGAAGAGCTCTATTTTGGCAAAAGATGAGGAGATTGAGAGGCTTCAAGCCATGAAAGGTTTAGCTGGTAGCAGAGTTAAGCGAAATATAATTCCACGAAGTAGAAGTAGTATCCAGTTACAATCTGCTAGCCCCCAACCAATTGATGATCATGCACAACAAAATGATTTTGTTGCAACTGCAGAAACTTCAGGATGTACAGATTCTGATTTTGACGGAAGATCAAGTGATTTTTCTGACGGTGGTGTTGCTGCAGGCACAGAAACTGATGGTTCTGAAAATTCCAGTCTCACTGAAGTCCCAAAACCACCATCAGAGAAGATGTCTAAAGGACTTCGCAGAACTGTTCAAGCGATGAGGAAATTTGGCCGAACTTCATCAAACACAATCCCTACAATCCCCACCGCCGGCCCAGTAAAGGAACCAGTGAAGAAGTCATCAAGTATTAAAAAAAGCATGAGTATAGGCACCCTTAAGCCTCCAAAACTGTGGAAGTAA | 1098 | 0.4171 | MHTLGILTQSRPNGLVVPDASLFPVKLPSDVIKLMEIGLKNRAIAATAMNERSSRSHSVVSVHVTGKDLKTGCTMAGNLHLVDLAGSERVDRSEVIGDRLKEAQHINRSLAALGDVIFSLSQKSSHVPYRNSKLTQLLQTSLGGQAKTLMFVQINSDVSSYSETLSTLKFAERVSGVELGAARSNKEGKDFREMMEQVSSLKSSILAKDEEIERLQAMKGLAGSRVKRNIIPRSRSSIQLQSASPQPIDDHAQQNDFVATAETSGCTDSDFDGRSSDFSDGGVAAGTETDGSENSSLTEVPKPPSEKMSKGLRRTVQAMRKFGRTSSNTIPTIPTAGPVKEPVKKSSSIKKSMSIGTLKPPKLWK | 365 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium4942g00002 | 365 | FunFam | Kinesin-related protein3 | 14 | 219 | - | - | |
Vium4942g00002 | 365 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 9 | 298 | IPR027640 | GO:0003777|GO:0007018 | |
Vium4942g00002 | 365 | MobiDBLite | consensus disorder prediction | 288 | 302 | - | - | |
Vium4942g00002 | 365 | MobiDBLite | consensus disorder prediction | 263 | 365 | - | - | |
Vium4942g00002 | 365 | PRINTS | Kinesin heavy chain signature | 78 | 96 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vium4942g00002 | 365 | PRINTS | Kinesin heavy chain signature | 47 | 64 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vium4942g00002 | 365 | PRINTS | Kinesin heavy chain signature | 127 | 148 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vium4942g00002 | 365 | MobiDBLite | consensus disorder prediction | 320 | 334 | - | - | |
Vium4942g00002 | 365 | Pfam | Kinesin motor domain | 11 | 175 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vium4942g00002 | 365 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 8 | 215 | IPR027417 | - | |
Vium4942g00002 | 365 | SMART | kinesin_4 | 1 | 185 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vium4942g00002 | 365 | ProSiteProfiles | Kinesin motor domain profile. | 1 | 177 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vium4942g00002 | 365 | Gene3D | Kinesin motor domain | 3 | 219 | IPR036961 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium4942g00002 | Vium-Chr4942 | 3560 | 5357 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium4942g00002 | 14 | 177 | Calmodulin-binding Proteins | AT5G65930 | 47.273 | 1.51e-37 | 142 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium4942g00002 | K10406 | - | gmx:100819914 | 463.381 |