Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4939g00005 ATGGAAAGTGGATTACCTTTGCTTAACTGTCTCTTGCAGCAGACTCTCAGAACCATTTGCACTTCTTCCAATTCTTCCAATTCTTCTAAGTGGGTTTATGCTGTCTTCTGGAGGATACTGCCTCGAAACTTTCCTCCACCAAGGTGGGAATTTGGAGGAACTGCGCTTGATCTCTCCAAAGGAAATAAAAGGAACTGGATTCTTGTCTGGGAAGATGGGTTCTGCGATTTTAACGAATGCGAACAGAGGAAGAGTGGTAGTGGTTATTTGAACGGTAGATTTGGAGCTGACGTATTCTTCAAAATGTCCCATGAGGTTTACAATTATGGAGAGGGACTAGTGGGAAAAGTTGCCGCAGATAATGGTCACAAATGGGTTTACAACGAGAGTCACAACAACGAGTGTGAAGCTAGCTATATTGCTACATGGAACACTTCGGTAGAGCCTCAACCAAAGGCATGGGAGTCTCAGTTCAATTCAGGGATTCAGAGTATAGTCATAATAGCAGTCAGAGAAGGCATTGTGCAATTGGGTTCTTTTAACAAGATTGCAGAGGACCTGAATCTGGTGATCAGCATACAAAGACAATTCAGCTACCTCCAAAGCATACCGGGTGTGTTTGGTATTCAAAGATCATACCTACCGATTCAACATCCATACATTGTGAAGCCCAGTTTCATAGAAAGCAATGGAATGCCTCCATATGACATGGCCTGGAACAACCCTCAAATAGGAGCACCAGGCCCATCTCTTTGA 756 0.4365 MESGLPLLNCLLQQTLRTICTSSNSSNSSKWVYAVFWRILPRNFPPPRWEFGGTALDLSKGNKRNWILVWEDGFCDFNECEQRKSGSGYLNGRFGADVFFKMSHEVYNYGEGLVGKVAADNGHKWVYNESHNNECEASYIATWNTSVEPQPKAWESQFNSGIQSIVIIAVREGIVQLGSFNKIAEDLNLVISIQRQFSYLQSIPGVFGIQRSYLPIQHPYIVKPSFIESNGMPPYDMAWNNPQIGAPGPSL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4939g00005 251 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 12 197 IPR025610 -
Vium4939g00005 251 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4939g00005 Vium-Chr4939 44038 46465 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4939g00005 13 201 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.053 1.73e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4939g00005 - - vum:124839635 520.39