Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium4939g00002 | ATGGAAGCAGGGGAAGATTGCTGCGTTAAGGTCGCGGTCCATGTTCGGCCACTCATCGCCGATGAGAAGCTTCAAGGATGCAAAGATTGCGTCACCGTCGTTTCTGGGAAGCCGCAGGTACAAATTGGTGCTCACTCCTTTACATTTGATCACGTTTATGGAAGCACTGGTTCTCCCTCAAGTGCCATGTTTGAAGAATGTGTTGCTCCCCTTGTTGATGGTTTGTTTCAAGGATATAACGCTACTGTTCTCGCTTATGGTCAGACAGGTTCTGGGAAAACGTACACCATGGGAACTGGCTTTAAAGATGGTTGCCAAACAGGAATAATACCTCAAGTTATGAACGTTTTGTTTAGCAAAATTGGGACCCTAAAGCACCAGATTGATTTTCAGTTGCATGTGTCTTTTATTGAGATTCTTAAAGAAGAAGTAAGAGACTTGTTGGACCCCTCGTCCATGAACAAACCAGAAACTGCAAATGGACATTCAGGAAAAATTACCTCTCCTGGGAAGCCACCAATACAAATTCGTGAGACATCAAATGGTGTCATCACCCTTGCAGGATCCACTGAAGTCAGTGTTACAACACTAAAGGAAATGGCTGCTTGCCTGGAACAGGGATCATTGAGCAGGGCAACTGGGAGCACAAATATGAACAACCAATCCAGTCGATCTCATGCCATCTTCACCATCACCCTAGAACAAATGCGAAAGCTGAATAGTCCTGGTGAGAGTGGTTTAAATGATACCATGAATGAAGAGTATCTTTGTGCCAAGTTACACTTAGTAGATCTTGCTGGATCAGAACGAGCTAAAAGAACAGGGTCTGATGGTCTGCGTTTTAAGGAAGGAGTTCACATTAACAAAGGCCTTCTAGCCCTTGGCAATGTTATTAGTGCACTTGGTGATGAAAAGAAGCGAAAGGAAGGTGTTCATGTTCCTTATAGGGATAGTAAGCTTACTAGGCTTTTGCAGGATTCACTAGGAGGTAACAGCAGAACTGTCATGATTGCTTGTATAAGTCCTGCTGATATTAATGCTGAGGAAACCCTTAACACTTTGAAGTACGCAAATCGTGCACGCAATATCCAAAATAAGCCTGTTATCAATAGAGACCCCATGTCCAATGAGATGCTAAAAATGCGACAACAGCTAGAGTATTTGCAGGCAGAACTTTGTGCTCGAGCTGGTGGCTCTTCTGAGGAAGTTCAGGTCCTTAAGGAAAGAATTGCTTGGCTTGAAGCTGCTAATGAAGATCTTTGCCGTGAACTTCATGAATACCGTAGTAGATGTTCTATTGCAGAACCAGGTGAAAGGGAAGCTTATGATGGTAACACATACATTGTGAAGACTGATGCAATTAAGAGGAGCTTACCTATCATAGAAGCTGAGTATCCAATGAGTGAAACAGTGGGTGATTCTAGGGAAATAGAAGAAGTAGCAAAAGAGTGGGAGCACACACTTCTGCAGAATAGTATGGATAGAGAGTTACATGAATTGAATAAACGCTTGCAACAGAAAGAGTCCGAGATGAAGCTTTTTGGAATATCTGATGCCGAAGTACTCAAGCAGCATTTTGGTAGAAAGATAACGGAATTGGAAGATGAGAAGAGAGTAGTGCAGCGAGAGAGAGATTGTCTTTTGGCAGAAGTTGAAAATCTCGCTGCCAATTCTGATGGACAAACACAGAAATTAGAGGATATTCACGCCCAAAAATTGAAAGCACTTGAAGCACAGATTATGGATCTGAAGAAGAAGCAAGAGAGTCAGGTCCAGCTTCTGAAGCAAAAGCAAAAAAGTGATGAAGCAGCAAAGAGACTGCAAGATGAAATACAGTGTATAAAGGCTCAAAAGGTTCAATTGCAGCAAAGGATAAAACAAGAATCAGAACAGTTTCGGCAGTGGAAGGCTTCAAGAGAGAAAGAGTTATTGCAATTAAAGAAGGAGGGAAGAAGAAATGAGTATGAAAGACACAAGCTGCAAGCTTTAAATCAGCGGCAGAAATTGGTTCTTCAGAGAAAAACTGAAGAAGCTGCGATGGCTACCAAGAGGTTAAAGGAGTTGTTAGAAGCACGTAAAACTTCAGGCCGAGAGACTTCAGTTACAACGAATGGAAGTGGAACAAATGGTCAGAGCAATGAGAAGTCTTTACAACGGTGGCTTGATCATGAGCTAGAAGTTATGGTAAAGGAGCACGAAGTCCGTTTTGAGTATGAGAAACAGAGCCAAGTGCGAGCTGCCCTTGCAGATGAATTAGCCATGCTGAAGCAAGTAAATGAGTTTGCTGCAAAGGGTCTCAGTCCTCCAAGAAAGAATGGATTTGCCAGGGCATCCTCCATGTCACCAAATGCAAGAATGGCCAGAATAGCTTCCCTTGAGAACATGCTGAGTATATTATCTAATTCACTTGTTGCAATGGCTTCTCAACTTTCTGAGGCAGAAGAACGAGAAAGAGCCTTCTCTAATCGTGGACGCTGGAATCAATTGCGTTCAATGGGAGAAGCGAAGAATTTGCTTCAATATATGTTTAATTCTGTTGCAGATGCTAGGTGCCAACTCTGGGAGAAGGACATGGAGATCAGGGAAATGAAAGATCAAATAAAAGAACTCGTTGGTCTCTTACGGCAAAGTGAGATGAAGAGAAAAGAAATTGAGAAGGAACTAAAAGTGAGAGAACAAGCTAATGGAAGCACACTGGCTACACCACCTTCGGGTGACTCCCCTAATCCATTGAAACAACAAGCTGAAGACATGAAAGGGCCTTTATCTCCAATGTCTATGCCAGTGCCTAAACAGCTAAAATACACGCCAGGGGTTGCCAATGGGTTGGTGAGGGAATCGGCAGCATTTGTAGATCAGGGTAGAAAGATGATACCCATCGGACACCTGTCAATGAAAAAACTAGCAATGGTAGGACAAGCTTCTGGAAAGTTATGGAGGTGGAAAAGAAGTCATCACCAGTGGCTGCTACAATTCAAGTGGAAATGGCAGAAACCATGGAGACTTTCAGAATGGATACGACATAGTGATGAGACGATCATGAGAACAAAACCACGCTCACAGGCTTTGCCACGTATCAGGTGA | 3084 | 0.43 | MEAGEDCCVKVAVHVRPLIADEKLQGCKDCVTVVSGKPQVQIGAHSFTFDHVYGSTGSPSSAMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQTGIIPQVMNVLFSKIGTLKHQIDFQLHVSFIEILKEEVRDLLDPSSMNKPETANGHSGKITSPGKPPIQIRETSNGVITLAGSTEVSVTTLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNSPGESGLNDTMNEEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVINRDPMSNEMLKMRQQLEYLQAELCARAGGSSEEVQVLKERIAWLEAANEDLCRELHEYRSRCSIAEPGEREAYDGNTYIVKTDAIKRSLPIIEAEYPMSETVGDSREIEEVAKEWEHTLLQNSMDRELHELNKRLQQKESEMKLFGISDAEVLKQHFGRKITELEDEKRVVQRERDCLLAEVENLAANSDGQTQKLEDIHAQKLKALEAQIMDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQCIKAQKVQLQQRIKQESEQFRQWKASREKELLQLKKEGRRNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLEARKTSGRETSVTTNGSGTNGQSNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALADELAMLKQVNEFAAKGLSPPRKNGFARASSMSPNARMARIASLENMLSILSNSLVAMASQLSEAEERERAFSNRGRWNQLRSMGEAKNLLQYMFNSVADARCQLWEKDMEIREMKDQIKELVGLLRQSEMKRKEIEKELKVREQANGSTLATPPSGDSPNPLKQQAEDMKGPLSPMSMPVPKQLKYTPGVANGLVRESAAFVDQGRKMIPIGHLSMKKLAMVGQASGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETIMRTKPRSQALPRIR | 1027 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium4939g00002 | 1027 | Coils | Coil | 860 | 894 | - | - | |
Vium4939g00002 | 1027 | SMART | kinesin_4 | 6 | 371 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vium4939g00002 | 1027 | MobiDBLite | consensus disorder prediction | 695 | 715 | - | - | |
Vium4939g00002 | 1027 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 9 | 393 | IPR027417 | - | |
Vium4939g00002 | 1027 | ProSitePatterns | Kinesin motor domain signature. | 258 | 269 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 | |
Vium4939g00002 | 1027 | Coils | Coil | 403 | 423 | - | - | |
Vium4939g00002 | 1027 | PRINTS | Kinesin heavy chain signature | 313 | 334 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vium4939g00002 | 1027 | PRINTS | Kinesin heavy chain signature | 78 | 99 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vium4939g00002 | 1027 | PRINTS | Kinesin heavy chain signature | 216 | 233 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vium4939g00002 | 1027 | PRINTS | Kinesin heavy chain signature | 259 | 277 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vium4939g00002 | 1027 | MobiDBLite | consensus disorder prediction | 894 | 911 | - | - | |
Vium4939g00002 | 1027 | Coils | Coil | 490 | 510 | - | - | |
Vium4939g00002 | 1027 | MobiDBLite | consensus disorder prediction | 150 | 174 | - | - | |
Vium4939g00002 | 1027 | MobiDBLite | consensus disorder prediction | 691 | 715 | - | - | |
Vium4939g00002 | 1027 | FunFam | kinesin-like protein KIN-4A isoform X1 | 2 | 391 | - | - | |
Vium4939g00002 | 1027 | Coils | Coil | 566 | 638 | - | - | |
Vium4939g00002 | 1027 | ProSiteProfiles | Kinesin motor domain profile. | 8 | 363 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vium4939g00002 | 1027 | MobiDBLite | consensus disorder prediction | 890 | 925 | - | - | |
Vium4939g00002 | 1027 | CDD | KISc_KIF4 | 7 | 364 | - | - | |
Vium4939g00002 | 1027 | PANTHER | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED | 1 | 1020 | IPR027640 | GO:0003777|GO:0007018 | |
Vium4939g00002 | 1027 | Coils | Coil | 523 | 557 | - | - | |
Vium4939g00002 | 1027 | Coils | Coil | 671 | 691 | - | - | |
Vium4939g00002 | 1027 | Gene3D | Kinesin motor domain | 2 | 391 | IPR036961 | - | |
Vium4939g00002 | 1027 | Pfam | Kinesin motor domain | 15 | 363 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium4939g00002 | Vium-Chr4939 | 15185 | 26600 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium4939g00002 | 9 | 387 | Calmodulin-binding Proteins | AT5G65930 | 33.420 | 2.56e-53 | 201 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium4939g00002 | - | - | gmx:100802585 | 1926.75 |