Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vium4936g00007 | ATGAATCGTAGAGTGAGGAGGAAAGTGGCAAGGAAAAGTAAAGGGAATGTGGTGCAATCTAGTTCCCCTGAAGTTCAGGAGGAGGTTTTGCATTTGGAACCCCAAGGAGTTGTTGATTGGAACTGCTTGCCTGATGACACAGTAATTCAGCTGTTGTCATGTCTGAGTTACCGAGATCGAGCTAGCTTGTCGTCAACTTGTAAAACATGGAGGTCTCTTGGTAGCTCCCCGTGTCTGTGGACTTCTCTGGATCTTCGTTCGCACAGGTTTGATGCTGACATGGCTTCATCACTTGCTCCCAGGTGTGTGCATCTACAGAAGCTCAGGTTTCGGGGGGAGGAATCTGCTAATGCAATAATTCATCTTCGAGCTAAGAACTTGCGTGAATTGAGCGGTGACTATTGCAGGAAGATTAGTGATGCAACTCTTTCAGTGATTGTAGCTCGGCATGAGGCACTTGAGAGCCTTCAGCTTGGACCAGATTTTTGTGAGAGAATAAGTAGTGATGCTATTAAAGCAATAGCTCATTGCTGTCCTAACTTGAGTAAGCTCAGACTCTCGGGTATCAGGGATGTAAATGGTGATGCTATTAATGTTTTGGCTAAGCATTGTCCAAAGTTGACTGATATTGGTTTCATTGACTGTCTGAATGTTGACGAGGTTGCACTGGGAAATGTGTTATCAGTTCGTTTCCTTTCTGTGGCGGGGACTTCAAGTATGAAGTGGGGTGTGGTTTCCCATCTTTGGCATAAACTTCCTAACCTGATTGGGTTAGATGTTTCAAGAACTGATATTGGACCATCCGCTGTTTTCAGACTGTTATCCTTAACACAGAATTTGAGGGTTTTGATTGCTCTGAATTGTCCTATCCTCGAAGAGGACACTAGCTTTTCTGCTAGTAAATATAAAAACAAGTTATTAGTTTCCCTTCGTACTGATATTTTTAAAGGACTGGCTTCTTTATTTTTTGATAATACAAAGAGAGGAAAAAATGTGTTTTTGAACTGGAGGACCTCAAAGAATAATGATAAGGATCTTAATGAAATTATACCCTGGCTTGAGTGGATGCTGTCTCACACACTTTTGCGTTCTGCTGAGAGTCCTCAGCAGGGTCTTGATAATTTCTGGGTTGAACAAGGTGGAGCACTTTTGCTTAGTCTAATGCAGAGTTCTCAGGAGGATGTTCAAGAGAGGGCAGCCACAGGACTTGCAACTTTTGTTGTAATTGATGACGAAAATGCTAGCATAGATTGTGGAAGGGCTGAAGCAGTTATGCGAGATGGAGGCATACGCCTCCTACTTGGCCTGGCAAAGTCTTGGAGGGAAGGGCTTCAATCTGAGGCGGCCAAGGCCATTGCAAATTTGTCTGTCAATGCCAATGTGGCCAAAGCTGTTGCAGAAGAAGGTGGGATTGAGATTCTTGCTGGTTTGGCTAGGTCTATGAACAAGCTGGTGGCTGAAGAGGCTGCCGGAGGATTATGGAATCTCTCTGTTGGAGAAGAGCACAAGGGTGCTATTGCTGAAGCCGGTGGAATACAAGCTTTAGTGGATCTTATCTTCAAGTGGTCCTCTAGTGGAGATGGAGTTTTAGAACGGGCGGCTGGTGCATTGGCTAATTTGGCAGCCGATGACAAGTGTAGTACAGAGGTTGCACTGGCAGGAGGTGTGCATGCTCTGGTGATGCTTGCACGTAAGTGCAAATTTGAGGGAGTGCAAGAGCAGGCTGCTCGTGCATTGGCTAACTTAGCTGCTCATGGAGATAGTAACAGTAACAATGCTGCCGTTGGACAAGAAGCAGGTGCTCTTGAGGCTCTTGTTCAACTTACTCGTTCTCCCCACGAGGGCGTTAGGCAAGAGGCTGCAGGTGCACTTTGGAATTTGTCATTTGACGATAGAAATCGAGAAGCCATTGCCGCATCTGGTGGAGTTCAGGCCTTGGTTGCTCTTGCCCAAGCTTGTGCTAATGCCTCCCCTGGACTTCAAGAGAGGGCTGCTGGAGCTCTGTGGGGATTATCAGTCTCGGAAACTAATAGTGTTGCCATTGGACGAGAAGGAGGTGTTGCACCTCTGATTGCACTTGCACGCTCTGAAGCAGAGGATGTTCATGAAACTGCTGCAGGGGCACTATGGAATCTTGCTTTCAATGCTAGTAATGCTCTACGAATAGTAGAGGAAGGTGGAGTATCTGCGCTTGTTGATCTCTGTTCTTCATCAGTATCAAAAATGGCACGCTTCATGGCTGCTTTGGCATTGGCTTACATGTTTGACGGGAGAATGGATGAATATGCTTTAGTAGGCACTCCATCTGAAAGTACTTCTAAGAGTGTGAGCTTGGATGGAGCTAGAAGGATGGCTTTGAAACACATTGAAGCTTTTGTTCTAATGTTCTCTGATCCACAAGCATTTGCGGCTGCTGCTGCGTCATCTGCTCCTGCAGCATTAGCACAGGTTACTGAAGGTGCACGTATTCAAGAAGCGGGACATCTAAGATGCAGTGGTGCTGAAATTGGAAGATTCATCACTATGCTACGAAATCAATCATCTATACTCAAGGCTTGTGCAGCATTTGCTCTTCTCCAGTTTACAATTCCTGGTGGACGACATGCCATGCACCATGCTAGCCTCATGCAGAGCTTGGGAGCACCCCGAGTTCTGCGTGGTGCGGCTGCAGCAGCAACCGCTCCACTTGAAGCAAAAATCTTTGCCCGAATTGTTCTTCGCAATCTTGAGTATCACCAGATAGAGCATACAGTGTAG | 2757 | 0.461 | MNRRVRRKVARKSKGNVVQSSSPEVQEEVLHLEPQGVVDWNCLPDDTVIQLLSCLSYRDRASLSSTCKTWRSLGSSPCLWTSLDLRSHRFDADMASSLAPRCVHLQKLRFRGEESANAIIHLRAKNLRELSGDYCRKISDATLSVIVARHEALESLQLGPDFCERISSDAIKAIAHCCPNLSKLRLSGIRDVNGDAINVLAKHCPKLTDIGFIDCLNVDEVALGNVLSVRFLSVAGTSSMKWGVVSHLWHKLPNLIGLDVSRTDIGPSAVFRLLSLTQNLRVLIALNCPILEEDTSFSASKYKNKLLVSLRTDIFKGLASLFFDNTKRGKNVFLNWRTSKNNDKDLNEIIPWLEWMLSHTLLRSAESPQQGLDNFWVEQGGALLLSLMQSSQEDVQERAATGLATFVVIDDENASIDCGRAEAVMRDGGIRLLLGLAKSWREGLQSEAAKAIANLSVNANVAKAVAEEGGIEILAGLARSMNKLVAEEAAGGLWNLSVGEEHKGAIAEAGGIQALVDLIFKWSSSGDGVLERAAGALANLAADDKCSTEVALAGGVHALVMLARKCKFEGVQEQAARALANLAAHGDSNSNNAAVGQEAGALEALVQLTRSPHEGVRQEAAGALWNLSFDDRNREAIAASGGVQALVALAQACANASPGLQERAAGALWGLSVSETNSVAIGREGGVAPLIALARSEAEDVHETAAGALWNLAFNASNALRIVEEGGVSALVDLCSSSVSKMARFMAALALAYMFDGRMDEYALVGTPSESTSKSVSLDGARRMALKHIEAFVLMFSDPQAFAAAAASSAPAALAQVTEGARIQEAGHLRCSGAEIGRFITMLRNQSSILKACAAFALLQFTIPGGRHAMHHASLMQSLGAPRVLRGAAAAATAPLEAKIFARIVLRNLEYHQIEHTV | 918 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vium4936g00007 | 918 | Gene3D | Ribonuclease Inhibitor | 33 | 318 | IPR032675 | - | |
| Vium4936g00007 | 918 | FunFam | Protein ARABIDILLO 2 | 355 | 502 | - | - | |
| Vium4936g00007 | 918 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 641 | 686 | IPR000225 | GO:0005515 | |
| Vium4936g00007 | 918 | SMART | arm_5 | 589 | 629 | IPR000225 | GO:0005515 | |
| Vium4936g00007 | 918 | SMART | arm_5 | 458 | 498 | IPR000225 | GO:0005515 | |
| Vium4936g00007 | 918 | SMART | arm_5 | 630 | 673 | IPR000225 | GO:0005515 | |
| Vium4936g00007 | 918 | SMART | arm_5 | 715 | 756 | IPR000225 | GO:0005515 | |
| Vium4936g00007 | 918 | SMART | arm_5 | 417 | 457 | IPR000225 | GO:0005515 | |
| Vium4936g00007 | 918 | SMART | arm_5 | 499 | 542 | IPR000225 | GO:0005515 | |
| Vium4936g00007 | 918 | SMART | arm_5 | 674 | 714 | IPR000225 | GO:0005515 |
Showing 1 to 10 of 32 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vium4936g00007 | - | - | gmx:100819086 | 1621.68 |
Showing 1 to 1 of 1 entries