Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium492g00001 ATGTTTAGCCAGAAAACAGGTGGAGAGGACAAATCGGACCCAACAATGTTCATAGTGACATACACTGGTGAACACGACCACCCTGCTCCTACTCATAAAAGCTCCCTTGCTGGCTCCACTCGCTACAAACCTCAGACTGGTGGAGACACAACCACCACAAAACCTGTTTCTCCAGCGACCTCATCAGAGGTGGCACAACACAGTACAAAGTCAGAGTGCATAGAAGAGGAGTTGGAAGATCTGATGAAAGATGATGAAGAAGCAAATGAATTTGACTCAACAGAAACAGTGGTATCAGATGATTTCTTTGAAGGGTTAGAGGAACTGACAGGGTCTGCCATTGACCCCTTTACAGCTATAGTTACCATTGAGCGGTTGGTCACTGGCCATACTGCTACCACTATACCGGGGGGGGGGGGGGGGGGGTCTGGTTTGGGTAAGTCTGAGAGTCGCTCTTTTCTGTTAGAGAATAGCACTGGAAATGGGTTGGTTTGCTTTGGGGGGTAG 507 0.4852 MFSQKTGGEDKSDPTMFIVTYTGEHDHPAPTHKSSLAGSTRYKPQTGGDTTTTKPVSPATSSEVAQHSTKSECIEEELEDLMKDDEEANEFDSTETVVSDDFFEGLEELTGSAIDPFTAIVTIERLVTGHTATTIPGGGGGGSGLGKSESRSFLLENSTGNGLVCFGG 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium492g00001 168 ProSiteProfiles WRKY domain profile. 1 30 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vium492g00001 168 MobiDBLite consensus disorder prediction 1 71 - -
Vium492g00001 168 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 12 110 IPR044810 GO:0003700
Vium492g00001 168 MobiDBLite consensus disorder prediction 33 68 - -
Vium492g00001 168 Coils Coil 64 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium492g00001 Vium-Chr492 3943 4582 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium492g00001 2 111 WRKY Transcription Factor Family AT4G01250 46.957 9.73e-22 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium492g00001 K13425 - gmx:100815829 156.377