Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4913g00001 ATGGGTAGTTGTGGAAGAGAAGGAGCTGTCAGGCAATATATAAGGTCAAAGGTTCCTCGTTTAAGGTGGACTCCCGAGCTGCACCGTTGCTTTGTTCACGCCATTGATAGCCTTGGAGGTCATCAAAAGGCTACTCCTAAGCTCGTTCTTCAGTTGATGGATGTTAAAGGGCTCACAATTTCACACGTCAAGAGTCATCTTCAGATGTACAGAAGCATGAGGGGCGACTTGGGGAGACAAGGTAGGACACACTCCCAACATAGGAACCAATCTTTTGAGGAGCACGATGATGGGTGTGTTGATGAAGTGAATGATGTTTGCGTTGAGTATTCATGTTCGAAACCCATGGGAATAGAATCTGATTCCTTCTTCGGCCACAGCAATCTCCCTCCGAAAAGAGCAAGAATCGAGACGAGGAGTTCCATCTCAGAGAGTCTGCAATGCAGCCAAAGATTATGTGATGCAGTTCCAAATCCGTACTGTTTTTATGATTATCTGCAGAAGCCCATGGCTGAGCACAAGGGAATAAAGGAGTTCTGTAAGGCTTCAACATGGCAGACACAACCCCATTCCTCTCTGTTACTACCACATTTTCCCACCCTCACTTCATTCCAATTTCCTAACCAACAATCAGATTTCCTCCAGGTGACAACATTAAATGAAGGAAAGAGCAGTGGAAAAGGAATTAATGTAGATGTGAACACTGAGACAGGTGAGGCAGAAGTTGAGGATGTAGGAGGGTATGAATTGTCATTGTCGCTTACATTGCCAAATCCTTCACCTCAGAGAAGTAATTGTTCATGTTCAGGCAGTGAGATCAGTGAGACAATCTCATCATGCCCTGCTGCAGGGTTTAGCAACTACAAGGACTGCACCAGTTCATCCAATCTCAATGAAACAATTAATTTGGACCTTTCTTTAGCCCTATGTGGCAATTGA 939 0.4462 MGSCGREGAVRQYIRSKVPRLRWTPELHRCFVHAIDSLGGHQKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGDLGRQGRTHSQHRNQSFEEHDDGCVDEVNDVCVEYSCSKPMGIESDSFFGHSNLPPKRARIETRSSISESLQCSQRLCDAVPNPYCFYDYLQKPMAEHKGIKEFCKASTWQTQPHSSLLLPHFPTLTSFQFPNQQSDFLQVTTLNEGKSSGKGINVDVNTETGEAEVEDVGGYELSLSLTLPNPSPQRSNCSCSGSEISETISSCPAAGFSNYKDCTSSSNLNETINLDLSLALCGN 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4913g00001 312 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Vium4913g00001 312 SUPERFAMILY Homeodomain-like 17 72 IPR009057 -
Vium4913g00001 312 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 7 93 IPR046955 GO:0003700
Vium4913g00001 312 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Vium4913g00001 312 FunFam Myb family transcription factor 17 75 - -
Vium4913g00001 312 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Vium4913g00001 312 Gene3D - 18 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4913g00001 Vium-Chr4913 11698 15694 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4913g00001 1 74 G2-like Transcription Factor Family AT1G14600 74.684 8.40e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vium4913g00001 Myb_DNA-binding 1.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4913g00001 - - gmx:100787188 440.654