Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4877g00005 ATGTTTCTGATTCAGGATCTCTTCTCCCTCCCGCGCCTCCACCACGTCATCTCAGAATCGGTTTTGCAGTCTCTAGGCGAGTCGGTTACGAGTTCCAGTTGCAAAAGCTCGGAGGTGGAGCAATGTCGCGACGAGTCAGCGGCGTTGGTGTTGAAATTCGTGGCGATGGCGTCGATTTTGTTGGCCGGATTTGGAGGGGTCGCGATTCCGCTGGCGGGGAAGTCGCGGCGGTTGCTTCGGCCGGATGGGGATGTCTTCGCGGCGGCGAGGGCGTTCGCGGCGGGGGTGATTCTGGCCACGGGGTTTGTGCACATGCTAAGGGATTCGTGGGAGGCGCTAGGAGACCCGTGTCTGAGAACGTACTGGAGCGCGTGGGCGAAGTTTCCATTCACCGGTTTCTTCGCCATGGTTTCCGCGCTCTGCACTCTCCTCGTTGACTTTATGGCGACTGCGTACTATGAGCGGAAGGATCGGCGTGGGCGCGTGGAGTGTGTGAAGGTTGTTGAGTGTGGGAGTTACGAGGAGGCGCTGTTGGAAACGGGAATAGTGGAGGTTAAGGATGTTGGAGGAGAGGGAAGTCACGCGGTGCAGCGAACACACTCCCACTCGCATCACCGTGATGATGTGGAAAGTACGGTTCGGCACGTCGTGGTCTCACAGGTATTGGAGCTTGGGATTGTATCTCATTCGATGATAATTGGGCTATCTCTGGGAGTTTCGCAAAGCCCTTGTACCATGAAACCCCTAATTGTTGCATTATCGTTCCATCAGTTCTTCGAAGGATTTGCACTTGGTGGATGCATCGCCCAAGCCCAATTCAAGACCTTGTCAGCAACAATTATGTCATGTTTTTTTGCACTAACAACGCCCCTAGGTGTTGCCATTGGGGCTAGTATTGCTTCAGTTTTTAACCCTTACAGTCCAGGAGCACTCATCACTGAAGGCATCTTGGACTCTTTCTCAGCTGGGATTTTAATGTACATGGCTTTAGTGGACTTAATAGCCGCAGATTTTCTTAGCAAGAAGATGCATTGCAACTTTAGGCTTCAGATTACATGTTACTGCTTGCTTTTCCTTGGAGCTGGCTTGATGTCTTCCATCGCAATTTGGGCATGA 1116 0.5251 MFLIQDLFSLPRLHHVISESVLQSLGESVTSSSCKSSEVEQCRDESAALVLKFVAMASILLAGFGGVAIPLAGKSRRLLRPDGDVFAAARAFAAGVILATGFVHMLRDSWEALGDPCLRTYWSAWAKFPFTGFFAMVSALCTLLVDFMATAYYERKDRRGRVECVKVVECGSYEEALLETGIVEVKDVGGEGSHAVQRTHSHSHHRDDVESTVRHVVVSQVLELGIVSHSMIIGLSLGVSQSPCTMKPLIVALSFHQFFEGFALGGCIAQAQFKTLSATIMSCFFALTTPLGVAIGASIASVFNPYSPGALITEGILDSFSAGILMYMALVDLIAADFLSKKMHCNFRLQITCYCLLFLGAGLMSSIAIWA 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4877g00005 371 PANTHER ZINC/IRON TRANSPORTER 48 364 - -
Vium4877g00005 371 NCBIfam ZIP zinc/iron transport family 34 371 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vium4877g00005 371 Pfam ZIP Zinc transporter 51 368 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4877g00005 Vium-Chr4877 68022 72606 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4877g00005 25 371 Inorganic Solute Cotransporters AT1G10970 60.847 4.97e-149 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4877g00005 K14709 - gmx:100809426 569.311