Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4804g00011 ATGGCCACCATTCCTCACCAATGGAATACCTTTTCACTCTCTCTCCTAATTCTCTCCGTCACCCTCTTCCAAAACCTAGCCCCCAATTCCTCTCCTCCCCCTCCCAATTACATCGTTGCCTTCCGTCACTACGCCGCCGTCGACAGCCACCGCGCCTACCTCGAATCCGCCCTCCGCCCCGAGGGATGGCGCTGGATCCCGCGCCAGAACCCGGCGGCGCAGTTCCCAACTGACTTCGGGCTGGTGGCCATCGAGGATTCCGGGGTGGTAGACGAGATTCGGAAACTGGGGTCGGTTAAATACGTGAGCTTGGACGTGAGCTACAAGAGGGGTTTGATGACGACGGATCAGAGACGCAACAAGAAGGTTGGGGCGTTCGAGGACGGGACGAAGAAGCGCCCCGGGAAGATCTTCACTGCGATGTCGTTTTGCGAGGCCGAAGAAGGTGAAAAAAGTGTTGGCAATCACAGCAGTTCCATCAAGTGGGGGCGGGAATTGATGATGCAGAGATCACAAGTTACTTCAATGTTTGGGGCTGAGGATCTCTGGGCGAAAGGGTACACTGGTGCCAAGGTCAAGATGGCTATATTTGATACTGGCATTCGGGCTGATCACCCTCATTTTCGTAACATCAAGGAGCGTACTAATTGGACCAATGAAGATACGTTGAATGATAATCTTGGACATGGGACTTTTGTTGCGGGTGTAATTGCTGGTGTAGATTCTGAGTGCCTTGGTTTTGCACCAGACACAGAGATTTATGCATTTCGAGTGTTCACTGATGCACAGGTATCATATACATCATGGTTCCTTGATGCCTTCAACTATGCAATTGCAACCAATATGGATGTGTTAAATTTGAGCATAGGTGGACCTGATTACTTGGATCTCCCGTTTGTTGAAAAGATATGGGAGATAACAGCAAATAATATAATCATGGTTTCTGCAATTGGAAATGATGGACCACTTTATGGAACTTTGAACAATCCAGCTGATCAAAGTGATGTTATTGGTGTTGGTGGTATTGACTATAGTGACCATATAGCCTCCTTTTCCTCACGTGGCATGAGTACCTGGGAGCTTCCTCATGGTTATGGCCGTGTAAAGCCAGACATAGTTGCATATGGACGGGACATTATGGGATCAAAAATTAGCGCAGGCTGTAAAAGCTTATCAGGAACTAGTGTTGCAAGTCCTGTAGTTGCCGGTGTTGTATGTTTGCTTGTCAGTGTCATTCCTGAATCTGAGAGAAAAAGTATCTTAAACCCAGCAAGCATGAAACAAGCATTGGTTGAGGGTGCTGCAAAGCTTTCTGGGCCTAACATGTATGAGCAGGGTGCTGGCAGAGTTGATCTGTTAGCATCATATGAGATTCTTAAGAGCTACAAACCTAGGACAAGCATATTTCCCAGTGTTCTTGATTATACAGATTGTCCTTACACATGGCCATTTTGTCGTCAGCCACTCTATGCAGGTGCCATGCCTGTCATCTTCAATGCCACCATTTTGAATGGAATGGGTGTGATTGGATACATTGAAAGTCCACCAACATGGCACCCTTTTGATGAAGAAGGGAATCTTCTAAGCATACATTTTACTTATTCTGAGATAATATGGCCTTGGACTGGTTATTTGGCTCTTCACATGCAGATCAAGGAAGAAGGTGCACAATTTTCTGGTAAGATTGAAGGTAATGTAACTCTTAAGGTTTCTAGCCCCCCAGCTCAAGGAGAGAAGGACCCTCAAGTTAGCATTTGTGTGCTTCAATTAAAATTAAATGTGGTACCAACACCACAACGATCTAAACGAATTTTGTGGGATCAGTTTCACAATATCAAATACCCACCTGGATATATTCCTAGAGATTCCTTGGATGTTCGTAATGACATTCTTGATTGGCACGGGGATCATCTACATACAAATTTTCACATCATGTTCAACATGTTACGAGATGCTGGTTACTATATTGAAACACTTGGTTCTCCTCTTACATGTTTTGATGCTCGGCATTATGGTACACTTTTGTTGGTGGATCTTGAGGATGAGTACTTTCCTGAGGAGATTGAAAAACTAAAAGATGATGTTTTAAATACTGGATTGGGATTAGCTGTCTTTGCCGAGTGGTATAATGTAGATTCAATGGTAAAGATGAGATTCTTTGATGACAATACACGGAGCTGGTGGACCCCAGTCACTGGAGGTGCTAACATTCCTGCACTTAATGATCTTTTGGCTCCATTTGGGATTGCTTTTGGAGATAAGATTTTGAATGGTGATTTTTCACTTTTGGGTGAGCAGAATCGATATGCATCTGGGACAAATATAGTGAGGTTTCCAAGGGGTGGTTATGTGCATAGCTTTCCCTTCTTAGATAGTTCAGAAAGTGGAGCCACACAGAGTGTGCTGCTAACTTCTGGCTCAACCAAGGCAGATTCTCCAATTCTTGGTCTCATGACAATTGGCGAAGGTCGCATAGCTGTGTATGGGGACTCCAATTGTTTGGATAGCAGTCATATGATAACAAATTGTTTTGCCCTTCTGAGGAAAATACTGGATTTTACCAGTGAAGATGTTAAAGATCCAACACTTTTCTCGGATACAATTAAACAAGACTCTCCTTTGTATGAAGCTGACAATCGATTGCCATCCCGTAGAACTGATGTAAATTTCTCCGCATATTCAGCCATTGTGGGTAAGGAATTGATTTGTGGGACTGACACAAGATTTGAAATTTGGAAAACTAAAGGTTACAACTTGCAAGTAAGAGGAAGAAACAGAAGACTGCCCGGTTATCCTATCATTGATTTGGGAAGGGGTTTCAATTCATCCTCTGGCACTTCTAACACTAAGCAACCCAGGTTGACCGTAAGAAGAAAGGGTGAATCTCTGGGGAACAGGTATTTGGGCCTGTTCTATGGAGATGAGCCTGATGCACCTGTGTTGGTTGTTGGTCATTGGTTGGTTCCTTTTGTTGTTGCATTAACTGGTATTTTGCTATTGAGTTTTTGGCGCATTCGTCAAAAGAGGCGTAGACGAAGAAAAGGATCAAGTTCTGGTAGATTGGCCAATGTAGTTTAG 3078 0.4415 MATIPHQWNTFSLSLLILSVTLFQNLAPNSSPPPPNYIVAFRHYAAVDSHRAYLESALRPEGWRWIPRQNPAAQFPTDFGLVAIEDSGVVDEIRKLGSVKYVSLDVSYKRGLMTTDQRRNKKVGAFEDGTKKRPGKIFTAMSFCEAEEGEKSVGNHSSSIKWGRELMMQRSQVTSMFGAEDLWAKGYTGAKVKMAIFDTGIRADHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVIAGVDSECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDIVAYGRDIMGSKISAGCKSLSGTSVASPVVAGVVCLLVSVIPESERKSILNPASMKQALVEGAAKLSGPNMYEQGAGRVDLLASYEILKSYKPRTSIFPSVLDYTDCPYTWPFCRQPLYAGAMPVIFNATILNGMGVIGYIESPPTWHPFDEEGNLLSIHFTYSEIIWPWTGYLALHMQIKEEGAQFSGKIEGNVTLKVSSPPAQGEKDPQVSICVLQLKLNVVPTPQRSKRILWDQFHNIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYIETLGSPLTCFDARHYGTLLLVDLEDEYFPEEIEKLKDDVLNTGLGLAVFAEWYNVDSMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSLLGEQNRYASGTNIVRFPRGGYVHSFPFLDSSESGATQSVLLTSGSTKADSPILGLMTIGEGRIAVYGDSNCLDSSHMITNCFALLRKILDFTSEDVKDPTLFSDTIKQDSPLYEADNRLPSRRTDVNFSAYSAIVGKELICGTDTRFEIWKTKGYNLQVRGRNRRLPGYPIIDLGRGFNSSSGTSNTKQPRLTVRRKGESLGNRYLGLFYGDEPDAPVLVVGHWLVPFVVALTGILLLSFWRIRQKRRRRRKGSSSGRLANVV 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4804g00011 1025 ProSitePatterns Serine proteases, subtilase family, serine active site. 393 403 IPR023828 -
Vium4804g00011 1025 FunFam subtilisin-like protease SBT6.1 161 455 - -
Vium4804g00011 1025 PANTHER PEPTIDASE S8 30 443 - -
Vium4804g00011 1025 Gene3D Peptidase S8/S53 domain 157 455 IPR036852 GO:0004252|GO:0006508
Vium4804g00011 1025 ProSitePatterns Serine proteases, subtilase family, histidine active site. 229 239 IPR022398 -
Vium4804g00011 1025 PRINTS Subtilisin serine protease family (S8) signature 189 208 IPR015500 -
Vium4804g00011 1025 PRINTS Subtilisin serine protease family (S8) signature 392 408 IPR015500 -
Vium4804g00011 1025 PRINTS Subtilisin serine protease family (S8) signature 225 238 IPR015500 -
Vium4804g00011 1025 CDD Peptidases_S8_SKI-1_like 183 439 IPR034185 -
Vium4804g00011 1025 SUPERFAMILY Subtilisin-like 171 452 IPR036852 GO:0004252|GO:0006508
Vium4804g00011 1025 ProSiteProfiles Serine proteases, subtilase domain profile. 161 456 - -
Vium4804g00011 1025 Pfam Subtilase family 190 439 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4804g00011 Vium-Chr4804 100017 106735 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4804g00011 263 1022 Subtilisin-like Serine Gene Family AT5G19660 79.373 0.0 1238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4804g00011 K08653 - gmx:100797547 1873.6