Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4804g00010 ATGGCCACCATTCCTCACCAATGGAATACCTTTTCACTCTCTCTCCTAATTCTCTCCGTCACCCTCTTCCAAAACCTAGCCCCCAATTCCTCTCCTCCCCCTCCCAATTACATCGTTGCCTTCCGTCACTACGCCGCCGTCGACAGCCACCGCGCCTACCTCGAATCCGCCCTCCGCCCCGAGGGATGGCGCTGGATCCCGCGCCAGAACCCGGCGGCGCAGTTCCCAACTGACTTCGGGCTGGTGGCCATCGAGGATTCCGGGGTGGTAGACGAGATTCGGAAACTGGGGTCGGTTAAATACGTGAGCTTGGACGTGAGCTACAAGAGGGGTTTGATGACGACGGATCAGAGACGCAACAAGAAGGTTGGGGCGTTCGAGGACGGGACGAAGAAGCGCCCCGGGAAGATCTTCACTGCGATGTCGTTTTGCGAGGCCGAAGAAGGTGAAAAAAGTGTTGGCAATCACAGCAGTTCCATCAAGTGGGGGCGGGAATTGATGATGCAGAGATCACAAGTTACTTCAATGTTTGGGGCTGAGGATCTCTGGGCGAAAGGGTACACTGGTGCCAAGGTCAAGATGGCTATATTTGATACTGGCATTCGGGCTGATCACCCTCATTTTCGTAACATCAAGGAGCGTACTAATTGGACCAATGAAGATACGTTGAATGATAATCTTGGACATGGGACTTTTGTTGCGGGTGTAATTGCTGGTGTAGATTCTGAGTGCCTTGGTTTTGCACCAGACACAGAGATTTATGCATTTCGAGTGTTCACTGATGCACAGGTATCATATACATCATGGTTCCTTGATGCCTTCAACTATGCAATTGCAACCAATATGGATGTGTTAAATTTGAGCATAGGTGGACCTGATTACTTGGATCTCCCGTTTGTTGAAAAGATATGGGAGATAACAGCAAATAATATAATCATGGTTTCTGCAATTGGAAATGATGGACCACTTTATGGAACTTTGAACAATCCAGCTGATCAAAGTGATGTTATTGGTGTTGGTGGTATTGACTATAGTGACCATATAGCCTCCTTTTCCTCACGTGGCATGAGTACCTGGGAGCTTCCTCATGGGTTAGCATCATATGAGATTCTTAAGAGCTACAAACCTAGGACAAGCATATTTCCCAGTGTTCTTGATTATACAGATTGTCCTTACACATGGCCATTTTGTCGTCAGCCACTCTATGCAGGTGCCATGCCTGTCATCTTCAATGCCACCATTTTGAATGGAATGGGTGTGATTGGATACATTGAAAGTCCACCAACATGGCACCCTTTTGATGAAGAAGGGAATCTTCTAAGCATACATTTTACTTATTCTGAGATAATATGGCCTTGGACTGGTTATTTGGCTCTTCACATGCAGATCAAGGAAGAAGGTGCACAATTTTCTGGTAAGATTGAAGGTAATGTAACTCTTAAGGTTTCTAGCCCCCCAGCTCAAGGAGAGAAGGACCCTCAAGTTAGCATTTGTGTGCTTCAATTAAAATTAAATGTGGTACCAACACCACAACGATCTAAACGAATTTTGTGGGATCAGTTTCACAATATCAAATACCCACCTGGATATATTCCTAGAGATTCCTTGGATGTTCGTAATGACATTCTTGATTGGCACGGGGATCATCTACATACAAATTTTCACATCATGTTCAACATGTTACGAGATGCTGGTTACTATATTGAAACACTTGGTTCTCCTCTTACATGTTTTGATGCTCGGCATTATGGTACACTTTTGTTGGTGGATCTTGAGGATGAGTACTTTCCTGAGGAGATTGAAAAACTAAAAGATGATGTTTTAAATACTGGATTGGGATTAGCTGTCTTTGCCGAGTGGTATAATGTAGATTCAATGGTAAAGATGAGATTCTTTGATGACAATACACGGAGCTGGTGGACCCCAGTCACTGGAGGTGCTAACATTCCTGCACTTAATGATCTTTTGGCTCCATTTGGGATTGCTTTTGGAGATAAGATTTTGAATGGTGATTTTTCACTTTTGGGTGAGCAGAATCGATATGCATCTGGGACAAATATAGTGAGGTTTCCAAGGGGTGGTTATGTGCATAGCTTTCCCTTCTTAGATAGTTCAGAAAGTGGAGCCACACAGAGTGTGCTGCTAACTTCTGGCTCAACCAAGGCAGATTCTCCAATTCTTGGTCTCATGACAATTGGCGAAGGTCGCATAGCTGTGTATGGGGACTCCAATTGTTTGGATAGCAGTCATATGATAACAAATTGTTTTGCCCTTCTGAGGAAAATACTGGATTTTACCAGTGAAGATGTTAAAGATCCAACACTTTTCTCGGATACAATTAAACAAGACTCTCCTTTGTATGAAGCTGACAATCGATTGCCATCCCGTAGAACTGATGTAAATTTCTCCGCATATTCAGCCATTGTGGGTAAGGAATTGATTTGTGGGACTGACACAAGATTTGAAATTTGGAAAACTAAAGGTTACAACTTGCAAGTAAGAGGAAGAAACAGAAGACTGCCCGGTTATCCTATCATTGATTTGGGAAGGGGTTTCAATTCATCCTCTGGCACTTCTAACACTAAGCAACCCAGGTTGACCGTAAGAAGAAAGGGTGAATCTCTGGGGAACAGGTATTTGGGCCTGTTCTATGGAGATGAGCCTGATGCACCTGTGTTGGTTGTTGGTCATTGGTTGGTTCCTTTTGTTGTTGCATTAACTGGTATTTTGCTATTGAGTTTTTGGCGCATTCGTCAAAAGAGGCGTAGACGAAGAAAAGGATCAAGTTCTGGTAGATTGGCCAATGTAGTTTAG 2814 0.441 MATIPHQWNTFSLSLLILSVTLFQNLAPNSSPPPPNYIVAFRHYAAVDSHRAYLESALRPEGWRWIPRQNPAAQFPTDFGLVAIEDSGVVDEIRKLGSVKYVSLDVSYKRGLMTTDQRRNKKVGAFEDGTKKRPGKIFTAMSFCEAEEGEKSVGNHSSSIKWGRELMMQRSQVTSMFGAEDLWAKGYTGAKVKMAIFDTGIRADHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVIAGVDSECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGLASYEILKSYKPRTSIFPSVLDYTDCPYTWPFCRQPLYAGAMPVIFNATILNGMGVIGYIESPPTWHPFDEEGNLLSIHFTYSEIIWPWTGYLALHMQIKEEGAQFSGKIEGNVTLKVSSPPAQGEKDPQVSICVLQLKLNVVPTPQRSKRILWDQFHNIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYIETLGSPLTCFDARHYGTLLLVDLEDEYFPEEIEKLKDDVLNTGLGLAVFAEWYNVDSMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSLLGEQNRYASGTNIVRFPRGGYVHSFPFLDSSESGATQSVLLTSGSTKADSPILGLMTIGEGRIAVYGDSNCLDSSHMITNCFALLRKILDFTSEDVKDPTLFSDTIKQDSPLYEADNRLPSRRTDVNFSAYSAIVGKELICGTDTRFEIWKTKGYNLQVRGRNRRLPGYPIIDLGRGFNSSSGTSNTKQPRLTVRRKGESLGNRYLGLFYGDEPDAPVLVVGHWLVPFVVALTGILLLSFWRIRQKRRRRRKGSSSGRLANVV 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4804g00010 937 PANTHER PEPTIDASE S8 30 699 - -
Vium4804g00010 937 Gene3D Peptidase S8/S53 domain 163 380 IPR036852 GO:0004252|GO:0006508
Vium4804g00010 937 PRINTS Subtilisin serine protease family (S8) signature 189 208 IPR015500 -
Vium4804g00010 937 PRINTS Subtilisin serine protease family (S8) signature 225 238 IPR015500 -
Vium4804g00010 937 SUPERFAMILY Subtilisin-like 173 367 IPR036852 GO:0004252|GO:0006508
Vium4804g00010 937 Pfam Subtilase family 190 358 IPR000209 GO:0006508|GO:0008236
Vium4804g00010 937 ProSitePatterns Serine proteases, subtilase family, histidine active site. 229 239 IPR022398 -
Vium4804g00010 937 ProSiteProfiles Serine proteases, subtilase domain profile. 161 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4804g00010 Vium-Chr4804 100017 106736 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4804g00010 365 934 Subtilisin-like Serine Gene Family AT5G19660 74.653 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4804g00010 K08653 - cpap:110818536 1358.58