Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium478g00002 ATGTTGTTGTATATTGGAGTATTTCTACCCATTATTCTCTCCTTCATATTCTACCAGATAAGTAGGAGACACAAGAGAAATATACCCTTTGCAGTTTTAAAATTACCAATCATTGGTATGCTACATTATCTTCTCCTAAATTTGTCCAACATTCACGATTACGCAATCTTTGTTTTGAAACATTATGGAGGAACTCTGATGTTCGAAGGACCTTGGTTCACAAACATGAACTTTATTCTCACAGCCGATCCCACGAACGTGCACCACATCACCACCAAGAACTTTAGCAACTACGGGAAAGGGTCCAATTTCAGTGAAATATTTGACGTTTTTGGAGGTGGGATTATTAATTCTGATAATCTCCATGCATGGAAAAAAGAAAGGTCAGTACTTCATTCACTGTTTCAAAGGCAAAGCCTTAAGATCTTCCTTCGAAAAGCCATTCAGAAGAAGCTAGAGAATGACCTAGTTCCATTTCTTGATGATACATCCGAGGTTGGAGCTGAGGTAGACTTACAATTTGCCCTTCGGAGGTTCACATTCGACATTGCCTGCTCTTGTTTTCTTGGTTATGATCCTCACTCTCTTCCAAACAAGAATACTAAGCTTTCTCAACCTACTTATCAGAGAGCTTTAGTTGTGATCGAGGAGTCATTATTTCACAGGCACATCACACCGAGATGTTTGTGGAAGTTGCAGGAGTGGCTCCAGATTGGACAAGAGAAGAAGTTCAAGGAGGCCAGAGAAATTTTTGATAAATTCTTGTATGAATGCGTTGCAGCCAAGCGTGAAGAGAAAAATAGATGCAATAGCACCAAAGAAGTAGATGATACTGATCATGACTTGCTGGGAGTGCTAATGGAAGAAGGAGATCAAAAGGGGAGAATAATGGATGACAAGTATCTTAGAGACACTGCATTTACCTTTGTCTCTGCTGGAAGTGGCACAATCAGTGCAAGTCTCAGTTGGTTCTTTTGGCTGGTTTCAACTCATCCACATGTGGAAGCTAAAATCCTTCAAGAGATCAAAGAAAATTGCATAAACCAAGATGGAACTTGGATTGCTTCTGGTGTTGAAGAGTTTGGTAAGTTAGCTTATCTCCATGGAGCTATATGTGAAGCACTGAGGCTTTTTCCTACTGTGCCCTATGATCACAAGTGTGCAATAAAATCTGATAGACTTCCTAGTGGACACCAT 1197 0.401 MLLYIGVFLPIILSFIFYQISRRHKRNIPFAVLKLPIIGMLHYLLLNLSNIHDYAIFVLKHYGGTLMFEGPWFTNMNFILTADPTNVHHITTKNFSNYGKGSNFSEIFDVFGGGIINSDNLHAWKKERSVLHSLFQRQSLKIFLRKAIQKKLENDLVPFLDDTSEVGAEVDLQFALRRFTFDIACSCFLGYDPHSLPNKNTKLSQPTYQRALVVIEESLFHRHITPRCLWKLQEWLQIGQEKKFKEAREIFDKFLYECVAAKREEKNRCNSTKEVDDTDHDLLGVLMEEGDQKGRIMDDKYLRDTAFTFVSAGSGTISASLSWFFWLVSTHPHVEAKILQEIKENCINQDGTWIASGVEEFGKLAYLHGAICEALRLFPTVPYDHKCAIKSDRLPSGHH 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium478g00002 399 PANTHER CYTOCHROME P450 26 399 - -
Vium478g00002 399 Pfam Cytochrome P450 43 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium478g00002 399 SUPERFAMILY Cytochrome P450 18 396 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium478g00002 399 Gene3D Cytochrome P450 19 399 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium478g00002 Vium-Chr478 7354 8571 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium478g00002 5 398 Cytochrome P450 AT4G39500 40.500 4.57e-94 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium478g00002 - - vum:124842341 823.928