Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4779g00001 ATGAAGCAGCTCATCCGTCGCCTCTCGCGCGTCGCTGACTCCTCAAATTACACGCTCCTCCGCTCGGACTCCTCCTCCTCGTCGCGGGGCTGCCGCCGGCGCCACCGCTCGGAGTCCTTCCGCGCCTCCAAGATCCGCCGATCCTCTGCACTGGTGCCGGAGGGGCACGTGCCGATCTACGTCGGCGACGAGATGGAGAGGTTTGTGGTTTGCGCTGAGCTTCTCAACCACCCTGTCTTCGTGCAACTACTCAACGAATCCGCGCAGGAATACGGCTACGAGCAGAAAGGTGTGCTCCGTTTGCCATGCCGCGTCTTCGATTTCGAGCGCGTGCTCCACGCGCTGCGCCTAGGCCTCGACGTGCCGGATGTTTCCGAGCTCGTTAACTTCTTGCCGGAAGAATCATCCTGA 411 0.6204 MKQLIRRLSRVADSSNYTLLRSDSSSSSRGCRRRHRSESFRASKIRRSSALVPEGHVPIYVGDEMERFVVCAELLNHPVFVQLLNESAQEYGYEQKGVLRLPCRVFDFERVLHALRLGLDVPDVSELVNFLPEESS 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4779g00001 136 Pfam Auxin responsive protein 8 115 IPR003676 GO:0009733
Vium4779g00001 136 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 39 112 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4779g00001 Vium-Chr4779 15712 16479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4779g00001 1 115 Calmodulin-binding Proteins AT2G24400 31.092 2.05e-14 64.7