Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4764g00003 ATGGCCACCAACCGTGGTGTCCTCTCGACACTTGACAAAGCCAAGACACAAAGATATCACTATAAGGTAATTGGGATAGCGGGGATGGGGTTCTTCACTGATGCATATGATCTCTTTTGCATCACTGCACTTATCAAGCTCATAGGTCGCCTGTACTACTATGACCCCATGAGTCACAGTCCAGGTAAGCTTCCAAAGAATGTAAGCAATGCAATAGCAGGAGTTGCATTGTGTGGCACCCTTTCAGGGCAGCTCTTCTTTGGCTGGCTGGGTGACAAACTCGGCCGAAAAAAGGTTTATGGCATAACCCTTTCCACCATGGTGGGGTGTGCCTTGGCATCAGGGCTTTCTTTTGGCTCCACAGCCAAAAGTGTGGTTGCTAGTCTTTGCTTCTTCAGGTTTTGGCTAGGATTTGGCATAGGAGGAGACTATCCTCTCTCAGCTGTTATAATGTCTGAATATGCCAATCAGAAGACTAGGGGAGCTTTTGTTGCTGCTGTTTTTGCTATGCAAGGAGTGGGAATATTGTTTGCTGGAGGTGTATCCATGTTGGTCTCCAAACTGTTCCTATTAGCTTATCCAGCCAGCGTTTTTGCAGTTGATCCAGTGCAATCTACTCAGCCACAAGGAGACTTTGTTTGGAGAATAGTGCTAATGTTTGGTGCATTTCCTGCTGCCTTCACTTATTACTGGAGAATGAAACTGCCAGAAACTGCAAGGTACACTGCCTTAGTGGAAGGAAATCACAAGAAAGCGGTTGAAGATATGGCTAAAGTTCTTGAAAATGATATACCTTTAGAAGAATCAAATACCAGGGTTGCTGCCACACCTAGCCTCTCTTATGGATTCTTCTCTTCAAAGTTTCTTGAGAAGCACGGCCTTCACCTTTTAGGAACAACCAGCACCTGGTTCTTCTTGGATATTGCCTTCTACAGTCTTCAGCTAGCACAAAAAGATATCTACCATGCAAGTGGATTTTTACCCGGTGCTTCCCAAATGAATGCCATAGAGGAGGTTTTTCTACTCTCCAAAGCAATGTTTGCAGTGGCACTGTTTGCCACTGTCCCTGGATACTGGTGCACAGTGTACTTCATTGACAAGATTGGAAGGTACAAAATCCAACTTGGCGGATTTTTTGCTATGTCTGTTTGCATGTTGTTTTTGGGACTCAATTATCCAGAAAAGGGGGGAGATGAATGCAACCCAGATGAAACATATGATTATTGTGGTGGCAAACACACCCTCTTTGTCATTCTTTTTGAAGTCACCCTTTTCTTTGCAAACTTTGGACCCAATAGCACAACATTTATAGTGCCAGCAGAGCTGTTCCCTGCCAGGTTCCGTTCAACATGCCATGGAATATCAGCAGCAGCTGGTAAAGCAGGAGCTATCATTGGTGCTTTTGTTGTACAAAGCTATACAAGTAATCCGCAAGACGAATCAGAAGGTATCAAGACCGCACTTATAGCACTTTCAGTTGTTAATATGCTAGGATTCCTCTGCACTTTCTTAGTGCCAGAAACACGAGGCCGGTCACTTGAAGAAATCTCTGGAGAAGATAAAGAACTCACTGGCAATGTTTCTCAAGACAATGCAAACGATAAAACAACTGATACAGGAAAGGAAACCAAAAACTCTAACGCTGATATAAGTCCAGCAAACTCAGTGGTTTAG 1674 0.4397 MATNRGVLSTLDKAKTQRYHYKVIGIAGMGFFTDAYDLFCITALIKLIGRLYYYDPMSHSPGKLPKNVSNAIAGVALCGTLSGQLFFGWLGDKLGRKKVYGITLSTMVGCALASGLSFGSTAKSVVASLCFFRFWLGFGIGGDYPLSAVIMSEYANQKTRGAFVAAVFAMQGVGILFAGGVSMLVSKLFLLAYPASVFAVDPVQSTQPQGDFVWRIVLMFGAFPAAFTYYWRMKLPETARYTALVEGNHKKAVEDMAKVLENDIPLEESNTRVAATPSLSYGFFSSKFLEKHGLHLLGTTSTWFFLDIAFYSLQLAQKDIYHASGFLPGASQMNAIEEVFLLSKAMFAVALFATVPGYWCTVYFIDKIGRYKIQLGGFFAMSVCMLFLGLNYPEKGGDECNPDETYDYCGGKHTLFVILFEVTLFFANFGPNSTTFIVPAELFPARFRSTCHGISAAAGKAGAIIGAFVVQSYTSNPQDESEGIKTALIALSVVNMLGFLCTFLVPETRGRSLEEISGEDKELTGNVSQDNANDKTTDTGKETKNSNADISPANSVV 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4764g00003 557 Pfam Sugar (and other) transporter 27 517 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vium4764g00003 557 MobiDBLite consensus disorder prediction 516 557 - -
Vium4764g00003 557 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 515 - -
Vium4764g00003 557 Gene3D MFS general substrate transporter like domains 19 534 IPR036259 -
Vium4764g00003 557 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 510 IPR020846 GO:0022857
Vium4764g00003 557 SUPERFAMILY MFS general substrate transporter 11 518 IPR036259 -
Vium4764g00003 557 MobiDBLite consensus disorder prediction 543 557 - -
Vium4764g00003 557 FunFam Inorganic phosphate transporter 1-6 19 532 - -
Vium4764g00003 557 CDD MFS_PhT 24 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4764g00003 Vium-Chr4764 15551 17695 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4764g00003 6 531 Inorganic Solute Cotransporters AT5G43350 60.748 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4764g00003 K08176 - gmx:100820250 931.784