Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4763g00003 CAGCTATGCAGTGGAGTTGATGAAAATGCAATTGGAGCATGCGCACAGCTTGTGTTTGCACCTATCGATGAGTCTTTTGCAGATGATGCTCTGTTACTGCCTTCTGGTTTCCGCATCATACCATTGGATCCTAAAACTGATGGTCCAGCTTCAACTAGGACACTGGATTTGGCATCAGCACTAGACATAGGATCTGGTAATGCTCGTCCTGCTGGTGAAACTGATCTGAATAACTACAACCTTAGGTCAGTCCTCACAATTGCATTCCAGTTTACTTTTGAGAACCATTTGCGGGACAATGTGGCTGTCATGGCTCGCCAATATGTGCGCAATGTTGTAAGATCAGTTCAGAGGGTTGCCATGGCAATTGCACCCTCTCGGCTCAGTACAGAGTTAGGGCCAAAGTCACTTACTGGTCCACCAGAGGCTCTTACCTTGGCAAGATGGATCTACAGAAGCTACAGGCTTCACACCTGCACAGACCTTTTCAGAGTTGAGTCCACATCTGGTGATGCAATCTTGAAGCAACTTTGGCACCATTCAGATGCAATATTATGCTGTTCTGTAAAAACTAATGCATCTCCAGTTTTCACCTTTGCCAACCAAGCTGGACTTGATATGCTTGAAACCACTCTTGTTGCTCTTCAAGACATAATGCTGGATAAAGTTCTTGATGAATCTGGCAGGAAGCTTCTCTGCATCGAGTTCTCCAAGATAATGCAACAGGGGTTTGCATATCTTCCAGCTGGAATATGTGTATCAAGTATGAATCGACCAGTGTCCTATGAGCAGGCCATTGCATGCAAAGTTTTGGATGATAATGATTCCAATCACTGCCTTGCCTTTGTGTTCGTGAACTGGTCTTTTGTCTAA 873 0.4479 QLCSGVDENAIGACAQLVFAPIDESFADDALLLPSGFRIIPLDPKTDGPASTRTLDLASALDIGSGNARPAGETDLNNYNLRSVLTIAFQFTFENHLRDNVAVMARQYVRNVVRSVQRVAMAIAPSRLSTELGPKSLTGPPEALTLARWIYRSYRLHTCTDLFRVESTSGDAILKQLWHHSDAILCCSVKTNASPVFTFANQAGLDMLETTLVALQDIMLDKVLDESGRKLLCIEFSKIMQQGFAYLPAGICVSSMNRPVSYEQAIACKVLDDNDSNHCLAFVFVNWSFV 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4763g00003 290 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 290 IPR044830 GO:0003700
Vium4763g00003 290 Pfam MEKHLA domain 145 289 IPR013978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4763g00003 Vium-Chr4763 23619 25235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4763g00003 1 290 Homeobox Transcription Factor Family AT2G34710 72.696 2.84e-144 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4763g00003 K09338 - vum:124839140 580.482