Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4762g00002 ATGCAAATAATGTATGAACAGATGCCTACTTTCTGGGTGTTTTCTTCCCTTATACCAATAGTTGGAGGAGTGGCGTTGGCATCAATGACTGAAGTCTCTTTCAATTGGATTGGCTTCATCACTGCTATGGCAGCTAACGTTACAAATCAATCAAGGAACGTTTTGAGCAAAAAAATGATGACTAGTGAAGAGGAAAGTTTGGACATTATCAATCTCTATGGAGTTTTAACAATGATTTCCTTCATGTTTTTGGTTCCATATGCCTTACTTGTGGAGGGTGTCAAGTTTTCTCCTTCATACCTGCAATATGCAGCAAGCCAAGGGCTTAATATTAGAGAGTTATGTGTCAGAGCAATTTTTTCTGCATTCTGCTTCCATGCATACCAACAGGTTTCATATATGATATTGGAGATGGTGTCACCTGTGACACACTCAGTTGCAAACAGTGTGAAGCGTGTGGTTATCATTGTTTCTTCAGTCATCTTCTTCCAAACTCCTGTCTCTCCTGTTAATGCAATTGGAACTGCTATTGCTCTTGTTGGAGTTTTCTTGTACTCAAGGGCAAAGAGGATTAAGCCTGTGCAAAAGACAAACTGA 597 0.397 MQIMYEQMPTFWVFSSLIPIVGGVALASMTEVSFNWIGFITAMAANVTNQSRNVLSKKMMTSEEESLDIINLYGVLTMISFMFLVPYALLVEGVKFSPSYLQYAASQGLNIRELCVRAIFSAFCFHAYQQVSYMILEMVSPVTHSVANSVKRVVIIVSSVIFFQTPVSPVNAIGTAIALVGVFLYSRAKRIKPVQKTN 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4762g00002 198 Pfam Triose-phosphate Transporter family 2 186 IPR004853 -
Vium4762g00002 198 SUPERFAMILY Multidrug resistance efflux transporter EmrE 111 190 - -
Vium4762g00002 198 PANTHER SOLUTE CARRIER FAMILY 35 3 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4762g00002 Vium-Chr4762 8874 10411 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4762g00002 7 197 Antiporters AT5G33320 62.304 9.13e-77 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4762g00002 K15283 - gmx:100819280 311.997