Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4761g00001 ATGGGAACTGCTTATGACCACGATTCTCCTCCTCTACTCGAAGACCTTAAGGTGACCATCCACAACTCCTCCATGATTTTCCCATCCAAAGAGACTGAGAAAAAGTCCATGTTCTTGTCCAACATAGACAAGGTCCTCACCTTTGATGTTGAAACGGTTCACTTCTTCGGATCCAACAATGATTTTCCTCCCCATGTTGTCACTGAAATGCTCAAGAATGCCCTAGAGGATGCCCTTGTTGTTTATGACTTCTTGGGTGGAAGATTGAAGGCACACCCTGAAACCCAAAGGTTAGAGATGGATTGTACTCCAGAAGGGGCAGGCTTTGTGGTCGCTTCCAGTCAATACAAACTGGATCAGATAGGGGATTTGGATTATCCAAACACAGCCTTTTCACAATTGGTGCACAAGAACAAGAATTTTCTTAAAGAGGGTGATGATCCTCTCTGTGTTGCCCAGATAACATCCTTCAAATGTGGTGGTTTTGCCATTGGCATTTCCACAAGCCACACTACATTCGACGGCCTCAGTTTCAAGACCTTCCTTGACAACGTCGCTTCCATAGCCGCTAAAAAGCCCTTGGCAGTGACGCCGTGCCATGACAGGCACCTGCTGGCGGCACGATCCCCGCCACGTGTCAACTTCCCACACCCGGAGATGCTGAAGCTGAACGACCTCCCCAAGTCCAACATCTTCGAAGCCTCAACGGAAGAGCTTCACTTCAAGGTCTTCAAAGTAACCTCAAACGACATCACGAAGCTCAAGGAAGAGGCGAGAAATTCAGTTGGTGGTGACAAAACCACACGCATCACAGGCTTTAACGCTATCACCGCCCACATATGGAGATGCAAGGCACTGTCATGCGATGATGATAGGAACCCTAATAGGTCATCGACGATTCTGTATGCTGTGGATATACGTTCGAGGTTGGAGCCTCCTTTGCCGAAATCTTACACGGGTAACGCAGTGTTAACGGCGTATGCCACAGCAACGTGTCGGGAGGTAGAAGAATGGCCGTTCATGAGGTTGGTTGAAGCAGTGCGTGAGGGTGCAACTAGGATGACGAATGAGTACGCAAGGTCGATCATTGACTGGGGAGAGATGAACAAAGGGTTTCCAAATGGGGAGGTTTTGGTGTCATCGTGGTGGAGATTAGGGTTTGAGGAGGTGGAGTTTCCATGGGGGAAGCCTAAGTATTGTTGCCCTGTGGTGTACCATAGGAAGGATATTATTCTGTTGTTTCCTCCTGTTGATGGAGGTGATGGGGTGAGTATTATTGTGGCTCTTCCTCCCAAGGATATGAACAAATTCCATGCACTCTTCAATAAGTTTTTGGGTGTTTGA 1344 0.4799 MGTAYDHDSPPLLEDLKVTIHNSSMIFPSKETEKKSMFLSNIDKVLTFDVETVHFFGSNNDFPPHVVTEMLKNALEDALVVYDFLGGRLKAHPETQRLEMDCTPEGAGFVVASSQYKLDQIGDLDYPNTAFSQLVHKNKNFLKEGDDPLCVAQITSFKCGGFAIGISTSHTTFDGLSFKTFLDNVASIAAKKPLAVTPCHDRHLLAARSPPRVNFPHPEMLKLNDLPKSNIFEASTEELHFKVFKVTSNDITKLKEEARNSVGGDKTTRITGFNAITAHIWRCKALSCDDDRNPNRSSTILYAVDIRSRLEPPLPKSYTGNAVLTAYATATCREVEEWPFMRLVEAVREGATRMTNEYARSIIDWGEMNKGFPNGEVLVSSWWRLGFEEVEFPWGKPKYCCPVVYHRKDIILLFPPVDGGDGVSIIVALPPKDMNKFHALFNKFLGV 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4761g00001 447 Gene3D - 227 444 IPR023213 -
Vium4761g00001 447 Pfam Transferase family 16 439 - -
Vium4761g00001 447 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 24 439 - -
Vium4761g00001 447 Gene3D - 14 221 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4761g00001 Vium-Chr4761 6737 11803 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4761g00001 16 445 Monolignol Biosynthesis Gene Families AT5G48930 31.278 1.34e-53 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4761g00001 K13065 - gmx:100305576 776.548