Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium475g00016 ATGGCGGCAGAGGCGGCGTTGTTCTTTTCTGTGGCATCAGTGGTGGAGGACGTGCTTCAGCAGCACGGTCCTCGCCTCAAAGATCTTGATTTGGAATCCAGGAAAGCAGAAGAAGCTGCATCAAGAAGATATGAGGCAGCGGGGTGGTTGAGAAAAATGGTTGGAGTAGTTGCGGCTAAAGATTTACCAGCAGAGCCCTCAGAGGAAGAGTTTAGGCTTGGTTTGAGAAGTGGGATTATTCTCTGTAATGTTATTAATAAAGTTCAATCCGGAGCTGTTCCCAAGGTTGTGGAGAGTCCTATTGATTCTGCATCGATCCCTGATGGGGCTCCATTAACGGCATATCAGTATTTTGAAAACGTGAGGAATTTCCTTGTGGCTGTCCAAGAAATTGGACTTCCTACCTTTGAGGCATCTGATCTGGAACAAGGAGGAAAATCGTCCAGGATTGTCAATTGCGTGTTGGCCCTGAAGTCCTATAGTGAATGGAAAACGAGCGGGGCAAATGGCGTGTGGAAATTTGGTGGAAATCTCAAACCCACTGTGTCTGCCAAATCTTTTGTTAGGAAAAACTCGGACCCATTTACTAATTCCTTGTCAAGGACTTCATCGATCAATGATAAACATCTCACAGTTCTTAGTTCTGACGTAGAGTCTGATAAAATGTCTGGTTCCCATTCTTTGAGTTCGCTTGTTCGTGCGATTCTATTGGATAAGAAGCCAGAAGAAGTTCCAAAGTTGGTTGAATCTGTTTTGTGCAAGGTTGTAGAGGAGTTTGAACAACGAATAGCAAGTCAAGGTGAAAAGGCAAAAGTAACTTCGATCGATCCTTTTTCTCAAAGCAATGGGTCTGTTGTGGCAGATAAAAAGGTGGAGGAGAAGATTCATGTGGTAACGAAAAAAGAAGATGGCATTCATAAAAGTCCAGTTAATGCTATGGTATCAAAAAAAGAGGATCGCATTCATAAAAATCTAGTTGCTGATGAGGAATCGCAAAGGCAATTTCTGAAGCAGAAAATGCTCTTTGATCAGCAGCAAAGAGAAATTCAAGAGCTAAGACATACTCTTCACACGACAAAATCTGGTATGCAGTTCATGCAAATGAAATTTCGTGAGGAGTTCTCTAATCTTGGAATGCACGTTCATGGCTTAGCTCACGCTGCTTCTGGATATCACAGAGTTCTTGAAGAAAATCGCAAGCTATACAATCAAGTCCAGGATCTTAAGGGGAGTATTAGGGTGTACTGTCGAGTAAGACCATTCTTTCCTGGACAATCAAACCATTTGAGCGCAGTGGAAAATATTAATGATGGAACTATCACAGTTAATATTCCTTCAAAAAATGGGAAGGGACGAAGGTCCTTCAACTTCAACAAAATCTTTGGACCATCTGCAACCCAAGCGGAAGTCTTCTTAGACATGCAGCCACTCGTTAGATCTGTTCTTGATGGCTATAATGTTTGCATATTTGCATATGGGCAAACAGGATCAGGAAAAACTTACACTATGACTGGACCAAAAGAAATCACAGAGAAAAGCCAAGGTGTAAATTACAGGGCTCTAAGCGACTTGTTTCTTATAGCGGATCAAAGAAAGGACACATTCCAATATGACGTTTCTGTTCAAATGATTGAGATTTACAATGAACAAGTCAGGGATCTTTTGGTCACTGATGGAACAAACAAAAGATTGGAGATTCGAAGTAGTTCTCAAAAAGGACTCAGCGTTCCAGATGCCAGCCTTGTCCCTGTATCATCAACTATTGATGTTATTGAACTAATGAACCTCGGTCAAAGGAACCGTGCAGTTGGAGCAACAGCTCTTAATGACCGCAGTAGCCGATCTCATAGTTGCTTGACTGTTCATGTTCAAGGAAGAGATTTGACATCTGGAGCTATCCTTCGTGGATGCATGCATTTGGTTGACTTGGCAGGAAGTGAGAGGGTGGATAAATCTGAGGCCACAGGAGATAGACTGAAAGAGGCACAGCATATTAACAAATCTCTTTCAGCTCTGGGAGATGTCATTGCTTCCCTTGCTCAGAAAAACTCACATGTACCTTACAGAAACAGTAAACTCACACAACTACTCCAAGATTCACTTGGAGGACAGGCAAAGACACTAATGTTTGTTCACATAAGTCCAGAGAGTGATGCTATTGGAGAAACAATTAGTACCTTAAAATTTGCTGAAAGAGTTGCCACAGTTGAACTTGGTGCTGCTAGAGTAAACAAAGATAGTTCAGATGTTAAAGAGCTCAAAGAACAGATTGCCAGCCTTAAGGCAGAACTAGCAAGAAAGGAAGGAGAATCAGAACATTCTTTATGCAGCAGCTCCGAAAAATACAGGACAAAGGGTATTGAGCTTTCACCTTACCAAATTCCTGACACCGGGGATCAGCTTGGATGCCGGCGACCAATGGTGGAGGTTGGCAATATAGAGCTTCAAAGTAATACAACAGTGAGGCACAAAACTCAGAGCTTTGATTTTGATGAGATATCAGGAAATTCACCACCATGGCCCCCGGTGAACAATAGTCTTGGACAAAACTATGCGGAGGATGACAAAGAATCTGGTTCTGGAGAATGGGTTGACAAGGTCATGGTCAACAACAAGCAAGACGTAAACAAAACTGAGAACCTCTTGGGGTGTTGGCAAACAAGCAATGGGAACTTATCTGAAGCCTTTTATCAGAAATATCTCAAAGATTCTTGCAAAATGTACTCAGAACAATCATACAACATGTTCATAGGAGGCAACCAGTTTAACATTGCGGGTTCAGATGACACGGATGAGCCCGATGCTGCCACCAGTGATTCCTCAGAACCTGATTTGCTTTGGCAATTTAATCATTCCAAACTCAGCAGCATGACCAGTGGAATCGGATCAAAGACTACAAGATCCATCTCTAAGTCAGCGAAAAGCCCCGAGTTGAGCAAGAATGCTGTTCATTCTTCTCCTTTGGGTCCTTCGCCTTCATTGAAACAGTCAAATGGCGTCTCACATCGAACAGGAAGGCATCCAGCTCCAGTTGACGTGAAACGTAGAAGTGGCGGTAGAAAATAA 3066 0.4263 MAAEAALFFSVASVVEDVLQQHGPRLKDLDLESRKAEEAASRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVINKVQSGAVPKVVESPIDSASIPDGAPLTAYQYFENVRNFLVAVQEIGLPTFEASDLEQGGKSSRIVNCVLALKSYSEWKTSGANGVWKFGGNLKPTVSAKSFVRKNSDPFTNSLSRTSSINDKHLTVLSSDVESDKMSGSHSLSSLVRAILLDKKPEEVPKLVESVLCKVVEEFEQRIASQGEKAKVTSIDPFSQSNGSVVADKKVEEKIHVVTKKEDGIHKSPVNAMVSKKEDRIHKNLVADEESQRQFLKQKMLFDQQQREIQELRHTLHTTKSGMQFMQMKFREEFSNLGMHVHGLAHAASGYHRVLEENRKLYNQVQDLKGSIRVYCRVRPFFPGQSNHLSAVENINDGTITVNIPSKNGKGRRSFNFNKIFGPSATQAEVFLDMQPLVRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALSDLFLIADQRKDTFQYDVSVQMIEIYNEQVRDLLVTDGTNKRLEIRSSSQKGLSVPDASLVPVSSTIDVIELMNLGQRNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGAILRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNSHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPESDAIGETISTLKFAERVATVELGAARVNKDSSDVKELKEQIASLKAELARKEGESEHSLCSSSEKYRTKGIELSPYQIPDTGDQLGCRRPMVEVGNIELQSNTTVRHKTQSFDFDEISGNSPPWPPVNNSLGQNYAEDDKESGSGEWVDKVMVNNKQDVNKTENLLGCWQTSNGNLSEAFYQKYLKDSCKMYSEQSYNMFIGGNQFNIAGSDDTDEPDAATSDSSEPDLLWQFNHSKLSSMTSGIGSKTTRSISKSAKSPELSKNAVHSSPLGPSPSLKQSNGVSHRTGRHPAPVDVKRRSGGRK 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium475g00016 1021 MobiDBLite consensus disorder prediction 956 1003 - -
Vium475g00016 1021 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 411 770 IPR027417 -
Vium475g00016 1021 Pfam Kinesin motor domain 417 735 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium475g00016 1021 Gene3D Kinesin motor domain 406 777 IPR036961 -
Vium475g00016 1021 FunFam Kinesin-like protein KIN-14I isoform A 27 179 - -
Vium475g00016 1021 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Vium475g00016 1021 Gene3D - 27 184 IPR036872 -
Vium475g00016 1021 FunFam Kinesin-like protein KIN-14I isoform A 406 778 - -
Vium475g00016 1021 Coils Coil 743 770 - -
Vium475g00016 1021 PRINTS Kinesin heavy chain signature 484 505 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium475g00016 1021 PRINTS Kinesin heavy chain signature 637 655 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium475g00016 1021 PRINTS Kinesin heavy chain signature 686 707 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium475g00016 1021 PRINTS Kinesin heavy chain signature 606 623 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium475g00016 1021 MobiDBLite consensus disorder prediction 956 1021 - -
Vium475g00016 1021 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Vium475g00016 1021 ProSiteProfiles Kinesin motor domain profile. 411 736 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium475g00016 1021 CDD CH_AtKIN14-like 42 159 - -
Vium475g00016 1021 CDD KISc_C_terminal 409 738 - -
Vium475g00016 1021 SUPERFAMILY Calponin-homology domain, CH-domain 38 173 IPR036872 -
Vium475g00016 1021 SMART kinesin_4 409 744 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium475g00016 1021 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 937 IPR027640 GO:0003777|GO:0007018
Vium475g00016 1021 SMART ch_5 42 160 IPR001715 GO:0005515
Vium475g00016 1021 MobiDBLite consensus disorder prediction 1007 1021 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium475g00016 Vium-Chr475 146065 152118 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium475g00016 399 772 Calmodulin-binding Proteins AT5G65930 41.867 4.42e-79 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium475g00016 K10406 - gmx:100795476 1796.56