Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4751g00002 ATGTTACTTGAAACATTGGCCGTTCCTGCAACACTCCTTGTGGTATTCATTTTGGTTCTATCCTTTGCCTTGTTCCATCCAAACCACCTTAAAGATGACAGAAAACATCCACCGGGTCCCAAACCCTTGCCAATTATCGGTAACCTTCACATGCTAGGAAAACTCCCACATCGAACCCTTCAAGCTCTTGCCAAAAAACATGGTCCCATAATGTCCATCAAGTTAGGACAGATCCCAGCCATTGTGGTTTCCTCACCTGAAACTGCTGAACTATTCCTCAAGACACATGATACTGTCTTTGCCAGCAGACCCAAAACTCAAGCATCAGAATACCTATCTTATGGAAGCAAGGGCATGGTGTTTTCTGAGTATGGATCCTATTATCGCCACGTGAGAAAGCTGTGCGCCACACAGTTTCTAAGTGCATCAAAGGTTGAGATGTTTCGTCCTTTGAGGAGGGAGGAGTTACGAGTGTTTGTGAAATCGCTTGAAAAAGTAGCAGCTTCAGGTGATGTTGTGAATTTGAGTCAGCAGATTGGGGAGCTTATGTCCAATATTGTCTGTAAAATGATACTTGGCCGTACCAAAGATGATAGATTCGACCTAAAAGGACTTACTCATGACGTTCTGTATTTGACTGGAGTGTTTAATGTAGCAGATTATTTACCTTGGGCAGCCATCTTTGATCTCCAGGGATTGAAAAGAAAACTTAAGAAAGTCAATAAGGCATTTGATCAAGTGTTTGAGCAAATTATCAAAGATCATGAACATCCTACGGATAGAGACAAGAAAAGTCTATATTCTGATGATTTTGTTGACATACTTGTATCACACATGCACCAAGCCATGGATGAGCAGGAACAGGATCACTTCATTGACAGAACTAATGTGAAGGCTATCATATTGGATTTGATTGCAGGAGCGTTTGAAACATCAGGTGTGGCCCTTGAGTGGGCCATATCAGAACTCTTAAGGCACCCAAAGGACATGAAGAAACTTCAAGAAGAGTTAACTGATGTAGTTGGAATGGACAGGTTTGTGGAAGAGTATGACTTATCAAAGCTACCTTTTCTGAATATGGTAGTTAAAGAGACTCTGAGGCTATATCCTCCTGGACCCTTGCTAGTGCCTCGTGAGTCCTCACAAAACATTTCTATTGACGGCTATCACATAAAGAAGAAGACAAGAATTTTAATCAACGCATGGGCCATAGGACGAGATCCTAAAGTGTGGTCGGAAAATGCTGATATGTTTTATCCTGAGAGATTTGTCGACAGTAACATAGACATCAGAGGACATGACTTTCGGCTTTTACCATTTGGTTCTGGTCGCAGAGGATGTCCTGGGATACAATTGGGTCTGACCACATTTGGCTTTGCTTTGGCTCAGTTAGTGCATTGCTTCAACTGGGAGCTTCCAACTGGAATTTCTTCTGATGATTTGGATATGACTGAAACATTTGGCCTTTCAATACCAAGAAGTAAGCATTTATTGGCTATACCAACTTATCGCCTGTCTAATAAACCTTAG 1530 0.4176 MLLETLAVPATLLVVFILVLSFALFHPNHLKDDRKHPPGPKPLPIIGNLHMLGKLPHRTLQALAKKHGPIMSIKLGQIPAIVVSSPETAELFLKTHDTVFASRPKTQASEYLSYGSKGMVFSEYGSYYRHVRKLCATQFLSASKVEMFRPLRREELRVFVKSLEKVAASGDVVNLSQQIGELMSNIVCKMILGRTKDDRFDLKGLTHDVLYLTGVFNVADYLPWAAIFDLQGLKRKLKKVNKAFDQVFEQIIKDHEHPTDRDKKSLYSDDFVDILVSHMHQAMDEQEQDHFIDRTNVKAIILDLIAGAFETSGVALEWAISELLRHPKDMKKLQEELTDVVGMDRFVEEYDLSKLPFLNMVVKETLRLYPPGPLLVPRESSQNISIDGYHIKKKTRILINAWAIGRDPKVWSENADMFYPERFVDSNIDIRGHDFRLLPFGSGRRGCPGIQLGLTTFGFALAQLVHCFNWELPTGISSDDLDMTETFGLSIPRSKHLLAIPTYRLSNKP 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4751g00002 509 PANTHER CYTOCHROME P450 93A3-LIKE 12 506 - -
Vium4751g00002 509 CDD CYP71-like 66 497 - -
Vium4751g00002 509 Pfam Cytochrome P450 37 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4751g00002 509 Gene3D Cytochrome P450 28 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4751g00002 509 Coils Coil 230 250 - -
Vium4751g00002 509 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4751g00002 509 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4751g00002 509 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4751g00002 509 SUPERFAMILY Cytochrome P450 34 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4751g00002 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Vium4751g00002 509 FunFam Cytochrome P450 83B1 24 500 - -
Vium4751g00002 509 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4751g00002 509 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4751g00002 509 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4751g00002 509 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4751g00002 509 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4751g00002 509 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4751g00002 509 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4751g00002 509 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4751g00002 Vium-Chr4751 27868 29784 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4751g00002 37 500 Cytochrome P450 AT3G48310 39.570 8.47e-124 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4751g00002 - - gmx:100782181 815.068