Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4744g00032 ATGATGGCGTCAGCATCAACGTGTAATTGTTGCAGAAGGAAGCATGTCTCAAACTCACCATCCCCATCTCCAACTCCAACTTCATCTCTTCCACTAATCCTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCGCAACATCACCCTTCACCAGTTTTTGCCCCTTCTCTCATCATCGCATTCCGAAACTGAACAAATCTTGAAATCCAAAGCATGCACTTCTCACTCTGCAAACTCCGAGGAACGGTTTAAGCGCCTCATCAAGAGTCGAGACTGTGCTGCTCGCTCAAGAGCCAAACAACAGGCTTATCAAAACCACTTGGAAACTAAACTTGCCCTTTTAATACAAGAAAATTCCACACTCAGAACCCAGGTTGAAGAGATGAAAATTCGATTGAAATGTGGTGGTGCACCTCCGAAAAAGCACAGTCTCTACAGAACCTCAACATCTCCATTTTGA 474 0.4367 MMASASTCNCCRRKHVSNSPSPSPTPTSSLPLILPSSSSSSSSSSSSSSRNITLHQFLPLLSSSHSETEQILKSKACTSHSANSEERFKRLIKSRDCAARSRAKQQAYQNHLETKLALLIQENSTLRTQVEEMKIRLKCGGAPPKKHSLYRTSTSPF 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4744g00032 157 Pfam bZIP transcription factor 87 134 IPR004827 GO:0003700|GO:0006355
Vium4744g00032 157 SUPERFAMILY Leucine zipper domain 87 134 IPR046347 GO:0003700|GO:0006355
Vium4744g00032 157 MobiDBLite consensus disorder prediction 1 49 - -
Vium4744g00032 157 Gene3D - 85 138 - -
Vium4744g00032 157 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 38 154 IPR043452 GO:0003700|GO:0045893
Vium4744g00032 157 Coils Coil 116 136 - -
Vium4744g00032 157 MobiDBLite consensus disorder prediction 1 23 - -
Vium4744g00032 157 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 84 134 IPR004827 GO:0003700|GO:0006355
Vium4744g00032 157 MobiDBLite consensus disorder prediction 30 49 - -
Vium4744g00032 157 SMART brlzneu 82 146 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4744g00032 Vium-Chr4744 232912 234535 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4744g00032 85 157 bZIP Transcription Factor Family AT3G56850 50.685 7.53e-13 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vium4744g00032 bZIP_1 1.8e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4744g00032 K14432 - vum:124839074 251.906