Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4744g00030 ATGCTACCAACCACGCATGCTCCCATTAGCTCCTGCAATCTACGAGAGCATAGGAACATGAAAGCCAACACAATTTTCTTGCTATTATTCTTTGTTCACTTGGTGTTTCTTGGAGAATCAAGATCATCATCATCTGCAGAAGCAGGGAATGGAAGTGACAACCAGACTAACCGTGAAGTTTATATCGTGTATATGGGAGCCGCCAAAGATTCTCTTCGGGATGATCATGCTTATCTTCTGAATTCAGTGCTAGCGAGGAACAAGAATGCTCTGGTTCGCAACTACAGGCATGGTTTTTCTGGGTTTGCTGTTCGTTTAACTAAAGAGGAGGCAAACTCAATTGCTCACAGACCTGGTGTGATCTCTGTCTTCCGGGATCCAATTCTGAAGCTCCACACAACCCGTTCTTGGGATTTCCTTAAGGACCAAAGCCCACTACCCAAAACCCACAGCCCAAACAGGGCCTCCAACTCTGCTCCCTCATCAGACGTCGTCATTGGCATTTTGGACTCAGGTATATGGCCAGAGTCAGCAAGCTTTAGCGACAAGGGAATGGGTCCCGTTCCATCCCGTTGGAAAGGCACTTGTATGAACTCCTTTAACTTCAATTCATCAAACTGTAACAGGAAGATAATTGGAGCAAGGTATTACCGTGATCCTAATGGAGACAAAGTGTTTGAGACACCAAGGGATGTAGACGGCCACGGAACCCACGTAGCAGCCACAGCAGCGGGAGTCACCGTGCCCGGTGTCTCATATTACGGAGTGGCGGCGGGGACTGCCCAGGGTGGGTCCCCGGAATCACGGTTGGCGATTTACCAAGTGTGCTTCAAGTATGAATGCCCTGGCTCGACGATTCTTGCGGCGTTTGACGATGCCATTGCTGATGGGGTCGATGTGATTTCGGTGTCGATTGGTCCCATCCCTGGGTTACGATCCGAGTTGAAATACGACCCAATCGCCATCGGGGCATTCCACGCCGTGGAGCGCGGCATTTTGGTGGTTGCCTCCGCGGGAAACGGCGGACCATACTTAAACACGGTGGTGAATGACGCACCTTGGATTTTTAGCGTTGCTGCCTCTTCGATAGACAGGGATTTTAAGTCCAACCTTGCCTTTGGTGATAACAAAGTCATCAAGGGTGAAGCTCTTAATTTCTCCCCCCTTTCAAATCTACCCAAATATCCACTTGTATATGGTGAGTCTGCCAAAGCAAAGAACGCCAGGTCAGCTGACGCAAGGCAATGCTTCCCAGGTGCATTCGCTAAACGTCTAGTAAAAGGGAAGATTGTCATATGTGACGGTAAAGATCATTCATATAGAACTAGTTTGAAAGTTGATGCTGTGCGGGAGGTAAGTGGACTAGGTGTGGTTCACATTTCTGACCCAATAGTAGGAGCAGAAAGAAAAGATTTTGGAGACTTCCCAGTAACAGAGATAAGTTCTAAAGATGCTGACATAATCTTTCAGTATGTTAATTCAACCAGCAATCCAGTGGCAACAATTCTCCCAACAGTTTCAATCCTTGATTTTAAGCCTGCGCCCATAATCCCATCCTTTTCAGGAAGAGGGCCTTCAGACTTTTCCAAGAATATTCTCAAGCCTGATATTGCAGCACCAGGGGTCAACATTCTTGCAGCATGGATCGGAAATCAGAGAGAAGGCGTTCCTAAACATAAAAAGCCCTCACAGTTCAATATCCTCTCGGGTACTTCTATGGCATGTCCACATGTTTCAGGACTTGCAGCTACCATCAAATCTCAAAACCCCACTTGGAGTGCTTCTGCAATCAAATCAGCAATAATGACCACTGCAACTCAAAAGAACAATTTGAAGGCTCCCATAAGAACGGAGACAGGATCAACAGCCACACCTTATGACTATGGAGCAGGGCAAATGACACTGTATGGACCATTCCACCCAGGGCTAGTTTATGAAAACAACACAGTTGACTACTTGAACTACTTATGCTATATTGGATATAATGTAACCGTGGTTAAGATTATATCGAGATCTGTTCCTAATAATTTCAGCTGCCCCAAAGATTCTAGTTCTCATCATATATCCAACATCAACTATCCTTCCATAGCAATCTCCGACCTCGAAGGGAAAAATGTTGTAGAAGTTACTAGAACTGTTACAAATGTTGGCGAAGAGAACGAAACAATTTACTCTCCTGTTATCGATGCTCCTAGAGGGATAAAGGTCAACTTGATTCCAAATAAACTTCAATTTACGAAAAATAGTAGAAAACTAAGCTACCGAGTTATCTTTTCATTCACGTCGACCATGTCGATGGACCATTTATTTGGATCAATTACTTGGAGTAATGGTAAATATGATGTTCGAAGTCCATTTGTATTAATTAAGAGCTAA 2376 0.4499 MLPTTHAPISSCNLREHRNMKANTIFLLLFFVHLVFLGESRSSSSAEAGNGSDNQTNREVYIVYMGAAKDSLRDDHAYLLNSVLARNKNALVRNYRHGFSGFAVRLTKEEANSIAHRPGVISVFRDPILKLHTTRSWDFLKDQSPLPKTHSPNRASNSAPSSDVVIGILDSGIWPESASFSDKGMGPVPSRWKGTCMNSFNFNSSNCNRKIIGARYYRDPNGDKVFETPRDVDGHGTHVAATAAGVTVPGVSYYGVAAGTAQGGSPESRLAIYQVCFKYECPGSTILAAFDDAIADGVDVISVSIGPIPGLRSELKYDPIAIGAFHAVERGILVVASAGNGGPYLNTVVNDAPWIFSVAASSIDRDFKSNLAFGDNKVIKGEALNFSPLSNLPKYPLVYGESAKAKNARSADARQCFPGAFAKRLVKGKIVICDGKDHSYRTSLKVDAVREVSGLGVVHISDPIVGAERKDFGDFPVTEISSKDADIIFQYVNSTSNPVATILPTVSILDFKPAPIIPSFSGRGPSDFSKNILKPDIAAPGVNILAAWIGNQREGVPKHKKPSQFNILSGTSMACPHVSGLAATIKSQNPTWSASAIKSAIMTTATQKNNLKAPIRTETGSTATPYDYGAGQMTLYGPFHPGLVYENNTVDYLNYLCYIGYNVTVVKIISRSVPNNFSCPKDSSSHHISNINYPSIAISDLEGKNVVEVTRTVTNVGEENETIYSPVIDAPRGIKVNLIPNKLQFTKNSRKLSYRVIFSFTSTMSMDHLFGSITWSNGKYDVRSPFVLIKS 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4744g00030 791 MobiDBLite consensus disorder prediction 146 160 - -
Vium4744g00030 791 SUPERFAMILY Subtilisin-like 95 681 IPR036852 GO:0004252|GO:0006508
Vium4744g00030 791 Gene3D - 364 509 - -
Vium4744g00030 791 ProSiteProfiles Serine proteases, subtilase domain profile. 136 639 - -
Vium4744g00030 791 Pfam Peptidase inhibitor I9 60 132 IPR010259 -
Vium4744g00030 791 CDD Peptidases_S8_3 129 606 IPR034197 -
Vium4744g00030 791 ProSitePatterns Serine proteases, subtilase family, serine active site. 570 580 IPR023828 -
Vium4744g00030 791 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 61 787 IPR045051 -
Vium4744g00030 791 MobiDBLite consensus disorder prediction 141 160 - -
Vium4744g00030 791 Pfam Subtilase family 161 617 IPR000209 GO:0006508|GO:0008236
Vium4744g00030 791 Gene3D Peptidase S8/S53 domain 163 652 IPR036852 GO:0004252|GO:0006508
Vium4744g00030 791 Pfam Fibronectin type-III domain 690 787 IPR041469 -
Vium4744g00030 791 FunFam Subtilisin-like protease SBT1.5 163 375 - -
Vium4744g00030 791 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 42 132 IPR037045 -
Vium4744g00030 791 Gene3D - 656 790 - -
Vium4744g00030 791 PRINTS Subtilisin serine protease family (S8) signature 161 180 IPR015500 -
Vium4744g00030 791 PRINTS Subtilisin serine protease family (S8) signature 569 585 IPR015500 -
Vium4744g00030 791 PRINTS Subtilisin serine protease family (S8) signature 231 244 IPR015500 -
Vium4744g00030 791 CDD PA_subtilisin_like 374 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4744g00030 Vium-Chr4744 218066 221435 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4744g00030 61 788 Subtilisin-like Serine Gene Family AT1G20150 51.340 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4744g00030 K25898 - vra:106760858 1450.26