Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4744g00026 ATGGAGTTGTGGAATGTGGTGTTTGTGTGGTGTGTTTTGTGTTTCGGTTTTCTTCATCACACTGAAGCCATTGTTAAGCTACGAGGAAATGAAACAATCCCAGCACTGATTTTATTTGGAGATTCGATCGTGGACACAGGGGCTAACAACAACTTAATCACGGCGTTTAAGAGCAATTTTCCTCCTTATGGAAGGGATTTTCATGCTGCTCAACCAACAGGAAGATTCAGCAATGGCAAGGTTCCTTCTGATTTCCTTGCTGAAGAATTGGGAATCAACGAATATTCAGTTGCATACACGAGTCCAAATTTGCAGCCTGATGATCTGTTGAAGGGAATCAACTTCGCTTCGGGTGGCACAGGATATGATCCTTTCACCTCACAACTTGCCTCTGTAATACCGTTATCTGAGCAACTGGAGCAGTTCAAAGAATATATAGGAAAGCTGAAAGCAAATTTTGGAGAAGCGAGAACGAACTTCATCTTGTCCAAAAGTTTAGTTCTTGTGGTATCAAGCAGCAACGACATTGCCAATACCTATTTTGCATCTGGAATTAGAAAACTGGATTACGACGTTCCGAGTTACACAGATATGTTAGTGCAACTCGCCTCTTCCTTTGTTAAGGAATTGTACGGTTTGGGGGTAAGGAGAATGGGAGTGTTTGGTGCACCTCCACTGGGATGCTTGCCTTTCATGCGAACAATGTTTGGAGGTGAAGAAAGAGAGTGCAGAGAGGAAATAAACATGGCATCGAAACTGTTCAATTCTAAACTCTCTTCAGAGCTTCACAAGTTACATCAAAATTGGCCTCAAGCGAAGATTGTGTATATCAATATTTACGATCCTTTGCTCAATATCATCCAAAATCCAATGAAATATGGATTAGAAGTTGCTGACAGGGGATGCTGTGGCACAGGGTCTGTAGAGGCAGGAATTCTGTGTAACCCGTTGGATCTGCAAACCTGCACAGATGATTCTAAATATGTGTTTTGGGACAGTTACCATCCCACTCAGAGGACGTATCAGATTCTTGTTGGGGAAATCCTCAACAAATATATGAACAATTTCTCCTGA 1074 0.4199 MELWNVVFVWCVLCFGFLHHTEAIVKLRGNETIPALILFGDSIVDTGANNNLITAFKSNFPPYGRDFHAAQPTGRFSNGKVPSDFLAEELGINEYSVAYTSPNLQPDDLLKGINFASGGTGYDPFTSQLASVIPLSEQLEQFKEYIGKLKANFGEARTNFILSKSLVLVVSSSNDIANTYFASGIRKLDYDVPSYTDMLVQLASSFVKELYGLGVRRMGVFGAPPLGCLPFMRTMFGGEERECREEINMASKLFNSKLSSELHKLHQNWPQAKIVYINIYDPLLNIIQNPMKYGLEVADRGCCGTGSVEAGILCNPLDLQTCTDDSKYVFWDSYHPTQRTYQILVGEILNKYMNNFS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4744g00026 357 FunFam GDSL esterase/lipase APG 25 353 - -
Vium4744g00026 357 Gene3D SGNH hydrolase 21 354 IPR036514 -
Vium4744g00026 357 Pfam GDSL-like Lipase/Acylhydrolase 37 344 IPR001087 GO:0016788
Vium4744g00026 357 PANTHER GDSL ESTERASE/LIPASE EXL3 11 347 - -
Vium4744g00026 357 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 36 47 IPR008265 GO:0006629|GO:0016298
Vium4744g00026 357 SUPERFAMILY SGNH hydrolase 35 352 - -
Vium4744g00026 357 CDD SGNH_plant_lipase_like 34 352 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4744g00026 Vium-Chr4744 192251 193954 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4744g00026 30 357 Pollen Coat Proteome AT1G75910 38.369 4.10e-72 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4744g00026 - - gmx:112997680 588.956