Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4744g00025 ATGGCTGTGTTTACGAAGTTCTTGAACTGTCGTACAACCACCTTAATGCTCCGTTTGATGTTACTGTTAGTTTTATCGTTGAGAACGAAGGGCTTGGTGAAACTGCCACCAAATATTTCAATTCCCGCAGTGATAGGTTTCGGAGATTCGATCATTGACCCGGGCAACAACAACAAGGTTAAAACGCTGGTGAAGTGTGACTTCCCTCCTTACGGTAAAGACTTCGACGGAGGAATTCCAACCGGTAGATTTTGCAACGGAAAAATTCCGTCGGATTTGCTAGTTGAAGAACTGGGTATCAAGAAGCTTTTACCAGCTTATTTGGATCCAAATCTCAAGCCAGACGACCTTCTTACCGGAGTGTGCTTTGCTTCCGGCGCTTCCGGATACGATCCTCTAACGCCAAAAATAGCGTCGGTGATATCAATGTCCGAACAACTAGAAATGTTCAAAGAATACGTAGAGAAGCTGAAACAAATTGTTGGACTGGATAGAACCAACTTCATCTTAGCCAACAGTTTTTTCCTTGTGGTAGCCGGAAGTGACGACATTGCAAACACCTATTTTGTCGCTCGCGCTCGTCAATTACAGTATGATATCCCTGCTTACACTGATCTCATGTGCAATTCCGCTACTGATTTCTTGAAGGAATTATATGGACTCGGAGCACGAAGAATCGGAGTACTGAGTGCACCACCGATTGGTTGCGTTCCATCGCAAAGAACACTTGCCGGAGGCTTGGAAAGAGAATGCGCAGGGGACTACAATTACGCGGCCAAGTTATTTAACTCTAAACTCTCAAGCAAACTTGATTCTCTGAGTGAGCTGCCAGATAGTAGGATTGTTTACATTGACGTTTACAACCCCCTAATGGATATCATTGTCAACTACCAAAGCTATGGCTATGAAGTTATGGACAGAGGCTGCTGTGGCACAGGGAAATTGGAGGTTTCTGTTCTCTGCAACCGTTTGGATGCAACATGTTCCGATGCTTCTAAATATGTGTTTTGGGATAGCTATCATCCTACTGAAAAAGTATACAAACAGCTCGTAGCCCAAATCCTTCAAAACTATTTAAGTCGCTTCTTCTGA 1092 0.4386 MAVFTKFLNCRTTTLMLRLMLLLVLSLRTKGLVKLPPNISIPAVIGFGDSIIDPGNNNKVKTLVKCDFPPYGKDFDGGIPTGRFCNGKIPSDLLVEELGIKKLLPAYLDPNLKPDDLLTGVCFASGASGYDPLTPKIASVISMSEQLEMFKEYVEKLKQIVGLDRTNFILANSFFLVVAGSDDIANTYFVARARQLQYDIPAYTDLMCNSATDFLKELYGLGARRIGVLSAPPIGCVPSQRTLAGGLERECAGDYNYAAKLFNSKLSSKLDSLSELPDSRIVYIDVYNPLMDIIVNYQSYGYEVMDRGCCGTGKLEVSVLCNRLDATCSDASKYVFWDSYHPTEKVYKQLVAQILQNYLSRFF 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4744g00025 363 Pfam GDSL-like Lipase/Acylhydrolase 46 351 IPR001087 GO:0016788
Vium4744g00025 363 PANTHER GDSL ESTERASE/LIPASE EXL3 23 353 - -
Vium4744g00025 363 CDD SGNH_plant_lipase_like 42 358 IPR035669 -
Vium4744g00025 363 Gene3D SGNH hydrolase 37 360 IPR036514 -
Vium4744g00025 363 FunFam GDSL esterase/lipase APG 33 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4744g00025 Vium-Chr4744 179693 183303 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4744g00025 21 357 Pollen Coat Proteome AT1G75910 38.596 3.07e-76 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4744g00025 - - gmx:100793078 596.66