Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4744g00021 ATGAGAGGGCTGAACAGAGCAGTGCTTCTAAGCAGAGCCCTTAGAAGCAATTTCACCGCCGTGTCCAGTGCTACTGCCACCCTTCAACGAGCGGTTCCCCATGGCACGATCACCGTGAGAGGCAACAATCCTTCTGTGAATGGGTTTAGATACGTTTCGTCTTCTTCCACTTCTCTGGCTTATGATGCCCAGACCAAGGCCTTCAACCCCAAAGAACTTGTCCTATTTCAGTACCAGGCCTGTCCATTCTGCAATAAGGTTGCAGCGTTTCTGGACTATTACGATATTCCGTTCAAAGTTGTTGAGGTGAATCCCATCAACAAGAAGGAGATCAAATGGTCCGACTACAAGAAAGTGCCCATCCTCACTGTTGACGGTGAACAGATGGTTGATTCTTCAGACATAATTGATAAGTTGATCAAGAGGATACATCCAGATTATGATCTAAATGCTGAAGAAGAGAAGAAGTGGCGAGAGTGGGTGGATAATCACTTGGTGCATGTCTTGTCACCAAATATATATCGAAATGTTCCTGAAGCTCTTGAATCATTTGATTATATCACCACCCAAGGAAATTTCAGTTTTTCTGAGAGGTTAGTGGCAAAGTATGGTGGGGCTGCAGCTATGTATTTTGTGTCAAAGAAATTGAAGAAGAAACACAACATCACCGATGAGCGAGCAGCACTGTATGGAGCTGCCGAACAATGGGTTGATGCTTTGAACGGCCGTAAATTTCTTGGTGGGTTGGATCCTAATTTAGCAGATCTTGCTGTGTTTGGTGTTCTGAGACCCATCCGCCATCTCCAGTCAGGTAGAGATATGGTAGAGCACACCAGGATTGGGAAATGGTTTTCTGAAATGGATCGTGCAGTAGGACAGTCTTCTAGGGTGAGTGAGCACAGCTAG 906 0.4547 MRGLNRAVLLSRALRSNFTAVSSATATLQRAVPHGTITVRGNNPSVNGFRYVSSSSTSLAYDAQTKAFNPKELVLFQYQACPFCNKVAAFLDYYDIPFKVVEVNPINKKEIKWSDYKKVPILTVDGEQMVDSSDIIDKLIKRIHPDYDLNAEEEKKWREWVDNHLVHVLSPNIYRNVPEALESFDYITTQGNFSFSERLVAKYGGAAAMYFVSKKLKKKHNITDERAALYGAAEQWVDALNGRKFLGGLDPNLADLAVFGVLRPIRHLQSGRDMVEHTRIGKWFSEMDRAVGQSSRVSEHS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4744g00021 301 CDD GST_C_mPGES2 147 292 IPR034335 -
Vium4744g00021 301 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 71 148 IPR004045 -
Vium4744g00021 301 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 22 299 - -
Vium4744g00021 301 Gene3D - 149 298 - -
Vium4744g00021 301 ProSiteProfiles Glutaredoxin domain profile. 61 160 - -
Vium4744g00021 301 SUPERFAMILY GST C-terminal domain-like 145 291 IPR036282 -
Vium4744g00021 301 SFLD Prostaglandin E synthase like.1 56 298 IPR034334 GO:0050220
Vium4744g00021 301 ProSitePatterns Glutaredoxin active site. 75 91 IPR011767 -
Vium4744g00021 301 SFLD Glutathione Transferase (cytosolic) 56 298 IPR040079 -
Vium4744g00021 301 Pfam Glutathione S-transferase, N-terminal domain 75 142 IPR004045 -
Vium4744g00021 301 SUPERFAMILY Thioredoxin-like 72 165 IPR036249 -
Vium4744g00021 301 Gene3D Glutaredoxin 61 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4744g00021 Vium-Chr4744 128078 131118 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4744g00021 81 155 Glutathione S-transferase Gene Family AT5G16710 33.766 7.04e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4744g00021 K05309 - gmx:100804696 526.168