Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4742g00002 ATGAAGGACGCAGATGTTTCAAGGCAGATCCAGCAGATGATCAGGTTCATCCGCCAAGAAGCCGAGGAGAAAGCTAATGAAATATCCGTTGCTGCTGAAGAAGAATTCAATATCGAGAAGCTGGAAATACTTGAAGCTGAAAAGAAAAAAATCAAGCAAGAGTATGAACGAAAAGCCAAACAGATTGACGTTCGTAGAAAAATTGAATACTCAACACAATTGAATGCATCCCGAATAAAAGTGCTTCAAGCACAGGATGATGCAGTGAATTCCATGAAGGACGCTGCTAGAACGGGTCTTTCGGGTCTCTCAAATGACAAGAAAGTGTACAAAAAACTCGTCAGAGACATGATTGTTCAGGGTTTACTACGTTTGAGGGAACCATCTGTGCTGATAAGATGCAGAGAGAGTGATCGTAAGCTAGTTGAGTCGTTGATAGAGGAAGCCAAAAAAGAATATTCAGAGAAAGCAAACGTGCAAGCCCCTAAAATTACCCTTGATGATCGTGTTTATCTCCCACCACCACCTAAGAAAAATGCTGCCACGGATTCCCATGAACCTTTTTGCTCTGGAGGAATAGTGTTGGCCTCAGAGGATGGGAAGATTGTGCTGGAAAACACCCTCGATGCACGGTTGGATGTTATTTTTCGACAGAAACTGCCCGAGATAAGAAAGATGTTGTTAGCTTGA 690 0.4261 MKDADVSRQIQQMIRFIRQEAEEKANEISVAAEEEFNIEKLEILEAEKKKIKQEYERKAKQIDVRRKIEYSTQLNASRIKVLQAQDDAVNSMKDAARTGLSGLSNDKKVYKKLVRDMIVQGLLRLREPSVLIRCRESDRKLVESLIEEAKKEYSEKANVQAPKITLDDRVYLPPPPKKNAATDSHEPFCSGGIVLASEDGKIVLENTLDARLDVIFRQKLPEIRKMLLA 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4742g00002 229 Pfam ATP synthase (E/31 kDa) subunit 16 227 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vium4742g00002 229 Hamap V-type proton ATPase subunit E [atpE]. 8 229 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vium4742g00002 229 Gene3D - 92 229 IPR038495 -
Vium4742g00002 229 Coils Coil 14 61 - -
Vium4742g00002 229 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 228 IPR002842 GO:0033178|GO:0046961|GO:1902600
Vium4742g00002 229 Gene3D - 1 62 - -
Vium4742g00002 229 SUPERFAMILY V-type ATPase subunit E-like 87 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4742g00002 Vium-Chr4742 24504 26302 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4742g00002 1 229 Primary Pumps ATPases(2) AT4G11150 68.122 4.09e-111 316
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4742g00002 K02150 - gmx:100791813 377.867