Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4738g00007 ATGGCCACTGCTAATCCGACATGTCCACCACCAATGAAGGCCACCTCCAACGGTGCCTTCCAACATGAAAATCCATTGGATTATGCGCTTCCCCTTCTAATCCTTCAGATATGTCTCGTCGTTGTCTTCACAAGATTGCTTGCATTCATTCTCAAACCTCTCAGACAACCCAGAGTCATTGCAGAGGTTATTGGAGGGATATTACTTGGGCCATCAGCGATTGGGAGGAATGAGAAATTCCTGAACACGATTTTCCCCAAGAAAAGCTTAACTGTGCTTGAAACTGTGGCCAATCTGGGTCTTCTGTTCTTCTTGTTTCTGGTGGGGCTTGAGCTTGACATGCGTTCGATACGCAGAACTGGTCACAAGGCCTTAGCCATTGCCGTTGCAGGCATCACATTGCCTTTTGTGCTCGGCATTGGCACCTCCTATGCTCTTCGAGCCACCGTATCCAAAAAGGCTAATCCAACCTCGTTCCTTATTTTCATGGGTGTTGCTCTCTCCATCACTGCATTTCCCGTCCTTGCACGCATCCTTGCCGAGCTCAAACTCCTCACAACTGATGCTGGTCGCATAGCAATGGCAGCAGCTGCTGTGAATGATGTCGCAGCATGGATACTGCTCGCTCTTGCCATAGCTCTCTCTGGCTCTAACTCATCCCCTCTTGTTTCCTTGTGGGTCATACTCTGTGCTGCTGCTTTTGTCCTCTTGGCTATCTTTGCCTTAAAACCCTTGCTCACAATGATGGCCAAGCGTTCCCCTGAGGGTGAACCAGTGCAAGAGATTTACATATGCATCACCTTGACACTGGTCCTGGCTTGCAGTTTTATCACTGATACCATTGGCATTCATGCACTGTTTGGAGCTTTTGTGGTCGGCATAGTCATGCCAAAGGATGGTCCTTTTGCTGGGGTGTTGATCGAGAAGATAGAGGACCTTGTGATGAGTCTGTTGTTGCCACTCTATTTTGTCTCCAGTGGTTTGAAGACTGATGTGACAACCATTAGGGGAACACTTTCTTGGTGTATGCTGGTGCTTGTTATATTCACTGCTTGCTTTGGAAAGATCAGTGGCACATTCGTTGTGTCACTTCTATGTAAGGTTCCTTTTAGAGAAGCCTTGGCTCTTGGATTTCTCATGAACACCAAAGGCTTGGTGGAGCTCATTGTTCTCAACATTGGCAAGGATCGCAAGGTTCTGAATGATCAGACATTTGCAATCTGTGTATTGATGGCACTGTTCACCACTTTCATCACCACCCCAATAGTGATGGCAGTGTATAAACCAGCTCGAAGGGGATCACCATACACGCATAAAACAGTTCAACGCAAGGATCCAGACACAGAGCTAAGAGTGCTGGCATGCTTCCACAGTACCTACAACATTCCCTCCTTGATCAATCTGATAGAGTCATCCCGGGGAACCAGAAAGCGTGGAAAGCTGTGCGTGTATTCCATGCACTTGATGGAACTCTCGGAGCGACCATCAGCCATCACAATGGTTCACACGGCACGCAACAACGGCATGCCCTTTTGGAACAAAAAGCACGATAACAAAGATCAAATGGTGGTTGCGTTTCAGGGTTATGGCCGTCTAAGCAGCGTCAACGTTCGTCCCATGACAGCCATATCCGCCTTCAGCAGCATGCACGAAGACATCTGCACCAGTGCACACCAAAAGCGAGTGGCACTCATTCTCCTCCCTTTTCACAAACACCAACACTTTGATGGGACGATGGAGTCACTGGGAAACTCATTGCGTGCAATGAACGGCCATGTCCTCAGCCGTGCTCCTTGCTCTGTGGGAATTTTGGTTGATCGTGGACTTGGAGGGACAAGACAAGTCCAAGCCAGCGATGTGTCGTACGATGTTGTTGTAGGGTTCTTCGGAGGAAGAGATGATCGTGAAGCACTTGCATATGGAATGAGACTTGCCGAACATCCTGGTATCTCACTCACTGTAGTGAAGTTTGTGGCTGCACCTGGTCAAACATTCGCCTTTGGTGCCAAATTGATCGGTATAACAGCGAACAAGGACAGGAAGATAATAAACGTGGATCAGGGAACAGGTAATAGTGACGAAGATAAACAAGAGGATGAACAGTTTTGGTCGGAGTTCATGAGTGTGAGATCTAACAACACGGAATCGATTACGTACGAGGAAAGATTGGTAGACAGCAAAGAAGATTTGAAAGCAGTGTTGAGGGAGAAGAATCGGAGCAATCTTATTTTGGTTGGTAGAATGCCGCAAGTGGCTCCTTTGGTAGAAAAAAGTGATTGTCCCGAACTTGGTCCCATTGGAAGCTATTTGGCTTCTTCTGAGTTTTCCACTTTGTCTTCAGTTTTAGTGTTGCAGCAATATAATCCTGAAACTGATGTTTATCCGATGGTTATGGAGGTTTCTGATTACATGGATGTGCCAGACACACCAACGGGTTTGAGTTTGTCCAGTTAA 2454 0.4719 MATANPTCPPPMKATSNGAFQHENPLDYALPLLILQICLVVVFTRLLAFILKPLRQPRVIAEVIGGILLGPSAIGRNEKFLNTIFPKKSLTVLETVANLGLLFFLFLVGLELDMRSIRRTGHKALAIAVAGITLPFVLGIGTSYALRATVSKKANPTSFLIFMGVALSITAFPVLARILAELKLLTTDAGRIAMAAAAVNDVAAWILLALAIALSGSNSSPLVSLWVILCAAAFVLLAIFALKPLLTMMAKRSPEGEPVQEIYICITLTLVLACSFITDTIGIHALFGAFVVGIVMPKDGPFAGVLIEKIEDLVMSLLLPLYFVSSGLKTDVTTIRGTLSWCMLVLVIFTACFGKISGTFVVSLLCKVPFREALALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAICVLMALFTTFITTPIVMAVYKPARRGSPYTHKTVQRKDPDTELRVLACFHSTYNIPSLINLIESSRGTRKRGKLCVYSMHLMELSERPSAITMVHTARNNGMPFWNKKHDNKDQMVVAFQGYGRLSSVNVRPMTAISAFSSMHEDICTSAHQKRVALILLPFHKHQHFDGTMESLGNSLRAMNGHVLSRAPCSVGILVDRGLGGTRQVQASDVSYDVVVGFFGGRDDREALAYGMRLAEHPGISLTVVKFVAAPGQTFAFGAKLIGITANKDRKIINVDQGTGNSDEDKQEDEQFWSEFMSVRSNNTESITYEERLVDSKEDLKAVLREKNRSNLILVGRMPQVAPLVEKSDCPELGPIGSYLASSEFSTLSSVLVLQQYNPETDVYPMVMEVSDYMDVPDTPTGLSLSS 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4738g00007 817 FunFam Cation/H(+) antiporter 15 32 434 - -
Vium4738g00007 817 Gene3D - 32 434 IPR038770 -
Vium4738g00007 817 PANTHER CATION/H + ANTIPORTER 7 788 - -
Vium4738g00007 817 Pfam Sodium/hydrogen exchanger family 39 422 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4738g00007 Vium-Chr4738 17196 20382 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4738g00007 1 803 Antiporter Super Family AT3G17630 68.820 0.0 1095
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4738g00007 K26731 - gmx:100818975 1346.64