Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4720g00002 ATGGCTACTTCCGACACCACCGCCACCAAGCTTCCCCTCAAGGAGATTCCCGGAAGCTACGGCCTCCCCTTCTTCGGACCCATGAGTGACAGACACGACTACTTCTACCACCAGGGACGCGACAAGTTCTTCGCCGACCGAATCCAAAAGTACAAAGCAACCGTCATCAGAACCAACATGCCACCCGGTCCCTTCATTTCCTCAAACCCTAAAGTCATCGCTCTCCTCGACGGCGTCTCCTTCCAGATCCTCTTCGACAACTCCAAGGTCGACAAGCGCGACGTCCTCGACGGCACCTTCATGCCTTCCACCTCCTTCACCGGCGGCTACCGCGTCTGCGCCTTCCAGGACACCACCGAGCCCTCCCACACGCTACTCAAGACCTTCTACCTCAACCTCCTCGCCTCCAAGCATGCCTCCTTCATCCCGCTCTTCCGCAACAACCTCTCAGAACACTTCGCTGACCTCGAGGACCAGCTCGCCGGGAGATCCTCCAAGGCCGACTTCAACACCTCCGTCGGCTCCGCCTCCTTCAACTTCCTCTTCCGTCTCCTCACCGGTCAAGACCCCTCCGCAACCAAAATCGGCTCCGATGGCCCCACCCTCGTCACGACCTGGCTCGCGGCGCAGCTCGCTCCGCTCGCCACTCTAGGTCTACCCAGGATCTTCAACTACGCAGAAGATTTCCTTATCCGAACAATCCCTTTGCCTGCGTGGACTGTGAAATCCAGCTATAAGAAACTCTGCGAGGGTTTTGCCAGCGCAGGTTCTTCCGTGCTGGACGAAGCGGAGCGGTTGGGGATAAAGAGGGACGAAGCTTGCCACAACCTTGTGTTCATGTTAGGGTTCAACGCGCAGGGAGGGTTGGTGAACCAGTTTCCGATTCTGATGAAGTGGGTTGGGTTGGGCGGGGAGAGTTTGCACAGACAGCTTGCAGAGGAAATCAGGAGCGTTGTTAAGGAAGAAAACGGGGTGAGTCTCCGTGCGTTGGATAGGATGACTTTGACTAAATCCGTGGTGTACGAGGTGATGAGGATAGAGCCGGCGGTTCCGTTCCAGTACGGAAAGGCCAGGGAAGATCTTGTGGTGGAGAGCCACGATGCGGCGTACGTGATCAAGAAGGGTGAGATGATCTTTGGATATCAGCCGTTCGCTACGAAAGACCCTAAGATCTTTGAGAGAGCGGAGGAGTTTGTGGCCCACAGGTTTGTTGGGCCTGATGGAGAAAAGTTGTTGAACCACGTGTTGTGGTCCAACGGTCGCGAGACGGAGGAGCCAACGCCGGATAATAAACAGTGTCCCGCAAAGAATCTGGTGGTGCTCCTGTGCAGGCTATACTTGGTGGAATTCTTCCTACGATACGATACTTTTACGTTCGATTTTAAACCTGTGGTTCTAGGTCCCCAAGTCACCATCAAGTCACTGGTTAAATCATCTTACTGA 1443 0.5516 MATSDTTATKLPLKEIPGSYGLPFFGPMSDRHDYFYHQGRDKFFADRIQKYKATVIRTNMPPGPFISSNPKVIALLDGVSFQILFDNSKVDKRDVLDGTFMPSTSFTGGYRVCAFQDTTEPSHTLLKTFYLNLLASKHASFIPLFRNNLSEHFADLEDQLAGRSSKADFNTSVGSASFNFLFRLLTGQDPSATKIGSDGPTLVTTWLAAQLAPLATLGLPRIFNYAEDFLIRTIPLPAWTVKSSYKKLCEGFASAGSSVLDEAERLGIKRDEACHNLVFMLGFNAQGGLVNQFPILMKWVGLGGESLHRQLAEEIRSVVKEENGVSLRALDRMTLTKSVVYEVMRIEPAVPFQYGKAREDLVVESHDAAYVIKKGEMIFGYQPFATKDPKIFERAEEFVAHRFVGPDGEKLLNHVLWSNGRETEEPTPDNKQCPAKNLVVLLCRLYLVEFFLRYDTFTFDFKPVVLGPQVTIKSLVKSSY 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4720g00002 480 PANTHER CYTOCHROME P450 26 11 455 - -
Vium4720g00002 480 SUPERFAMILY Cytochrome P450 11 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4720g00002 480 FunFam Allene oxide synthase, chloroplastic 11 480 - -
Vium4720g00002 480 CDD CYP74 47 473 - -
Vium4720g00002 480 Pfam Cytochrome P450 309 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium4720g00002 480 Gene3D Cytochrome P450 11 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4720g00002 Vium-Chr4720 6671 8526 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4720g00002 6 480 Cytochrome P450 AT5G42650 51.261 5.00e-170 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4720g00002 K01723 - gmx:100810890 832.017