Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium4717g00023 ATGTCCAAATTGAAAGCTAGAGACAACAATCCTCTTGAGGTCGCTCTTTTCGATGTTGAATCTCGGTCTATAGTCTCTGATGAGAATGATCCACTGTCTTCGATCAAGGTAGAGATTTGCGTCCTTAATGGTGAGTTTGGTTCAGATGGCAGTGAAAATTGGAGCAAAGATGAATTCAAATCCAAAATCTTACGTCAAAGAGAGAATAAAGGGCAGCTACTGAAAGGAGATACGGTTATTGCGCTTAAAAATGGAGTAGGTTTTATCCACAATGAATTCACTGACAACTCATTTTGGATAAGAACAGGACGTTTCAGATTAGGAGCGATGGTTGCAAAATCAAATATGAATGACGCATTAATCATCAGGGAAGGTATAAGTAAACCTTTTAGAGTCAAGGACTACAGAAGTAAGTTGAACAAGAAAAAGGATCCAACCCTCAGTGATGAAATATGGCATTTTAAACATATATCAAAAAAAGGGAAAATTTTTGAGCTGCTTTCTGAGGACGGGATACATACTGTTGGCGATTTTTTGAAGGAGCTTGAAACCGATCCATTATCTTTGGAAGAGGTATTAAGGAAGAAAACACTTTTAGGATAG 603 0.3765 MSKLKARDNNPLEVALFDVESRSIVSDENDPLSSIKVEICVLNGEFGSDGSENWSKDEFKSKILRQRENKGQLLKGDTVIALKNGVGFIHNEFTDNSFWIRTGRFRLGAMVAKSNMNDALIIREGISKPFRVKDYRSKLNKKKDPTLSDEIWHFKHISKKGKIFELLSEDGIHTVGDFLKELETDPLSLEEVLRKKTLLG 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium4717g00023 200 Pfam Calmodulin binding protein central domain 147 195 IPR046830 -
Vium4717g00023 200 PANTHER OS02G0177800 PROTEIN 2 194 IPR012416 GO:0005516
Vium4717g00023 200 Pfam Calmodulin binding protein-like N-terminal domain 2 134 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium4717g00023 Vium-Chr4717 190148 191120 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium4717g00023 3 193 Calmodulin-binding Proteins AT4G25800 38.342 7.91e-35 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium4717g00023 - - var:108327130 375.555